Pseudomonas sp. CCOS 191, CCOS191_RS12460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CCOS191 genome assembly Pseudomonas sp. strain CCOS191, chromosome : I. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGGTGTACCGCGCCCGCCCCGACGTCAACTGCATCATCCACACCCACCCTACCCACGTCGCCGCGCTGTCGATGCTCGAAGTGCCGCTGCAGGTCTC GCACATGGACCTGTGCCCGCTGTACGAAGACTGCGCATTCCTCGAAGCCTGGCCGGGCGTGCCAGTGGGTAACGAAGAAGGCGAGATCATCAGCGCCGCC CTGGGCGACAAGCGCGCCATCCTGCTCTCGCACCACGGCCAGCTGTCCACCGGCACCAGCATCGAGCAGGCCTGCGTCTACGCCCAGCTGATCGAGCGCG CCGCGCGCCTGCAACTGCTGGCGATGGCCGCCGGCACAATCAAGCCAATCGCCCCGGAGCTGGGCCGCGACGCCCACGACTGGATCGACCGGCCCAAGCG CCACGGCGCCGCCTTCAACTACTACGCCCGGCAGGCCCTGCGCAGCCACGCCGATTGCCTGAACTGATCCCTTTACGCCTTGCTTGCGGAGCCTTGCACA
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| DNA Sequence for Gene |
>CCOS191_RS12460
ATGACTAATCAATTCCACGGCATCATCGGCTACACCATCACCCCGTTCAGCGCCGACGGCGAGCAGCTCGACCTGCCCGCGCTGGGCCAGTCCATCGACC GCCTGATCGCAGGCGGCGTCCACGCCATCGCCCCGCTGGGCAGCACTGGCGAAGGCGCTTATCTGAGCGACAGCGAATGGCAGCAGGTCGCCCAGTACAG CCTGGAGCGCATTGCCAAGCGCGTGCCGAGCATCGTCAGCGTCTCCGACCTGACCACCGCCGGCGCCGTGCGCCGCGCCCGCTTCGCCCAGCAGCACGGC GCCGACGCGGTGATGGTGCTGCCGGCGGCCTACTGGAAACTCAGCGAAGCCGAGATCGTCCAGCACTACCGCGCCATCGGCGCGGCCATCGATTTGCCGA TCATGCTCTACAACAACCCGGCCACCAGCGGCACCGACATGCCGGTGGAGCTGATCCTGCGAATCGTGCGCGAAGTCGACAACGTGACCATGGTCAAGGA GAGCACCGGCGACATCCAGCGCATGCACAAGCTGCAACTGCTCGGTGAGGGCCAAGTGCCGTTCTACAACGGCTGCAACCCGCTGGCACTGGAAGCCTTC GTTGCCGGTGCCACGGGCTGGTGCACGGCGGCGGCCAACCTGATTCCCGAACTGAACCTGCGGCTGTACCAGGCGGTGCAGAGCGGTGAGCTGGAACAGG CCAAGGCGCTGTTCTACCGCCAGCTGCCGTTGCTCGACTTCATTCTCAAGGGCGGCTTGCCGGCGACCATCAAGGCTGGCCTTGAGATGACCGGGTTGCC GGTAGGCGAGCCACGGCGGCCGGTGTTCGGGCTGGATGCCGAGGGCCGCGACAAACTGAAGACGCTGCTCGACGCTTTGCGTCAGGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTAACAAACGCACCTGTGGGAGTTCGCTTCCACAGGTCATTGCACACACTTGAGAAGCCCACCCCAAACCCGGAGAATGCCCCCGACCCAAACGACCAG AAGCCATGGAAAAGGACCTTTCCAGTGAACCAGAAACAACGCGACGCCCTCAGCAAATTCCTCAGCTATGTACTGCGCCACGCCCCCGAATCCATCGACC TGTCCCTCGACCGCGACGGCTGGGCCGATGTCGATGCGCTGATCCACGGCGCCGGCAGGCAAGGTCACGCCTTCGACCTGCACGCCCTGCGTGAAGTGGT CGAGACCAATGACAAGCGCCGTTTCACCCTCTCCGACGATGGCCGCCGCATCCGCGCCGCCCAGGGCCACAGCAGCAACCAGGTCGAAGTGCGCCATGTC GCCAAGACGCCACCCGCCCTGCTCTATCACGGCACCGCCAGCCGCTTCCTGGCCTCCATCGAAGCACAGGGCCTGATTCCGGGCAGCCGTCATCATGTGC
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| Amino Acid Sequence |
>dihydrodipicolinate synthase
MTNQFHGIIGYTITPFSADGEQLDLPALGQSIDRLIAGGVHAIAPLGSTGEGAYLSDSEWQQVAQYSLERIAKRVPSIVSVSDLTTAGAVRRARFAQQHG ADAVMVLPAAYWKLSEAEIVQHYRAIGAAIDLPIMLYNNPATSGTDMPVELILRIVREVDNVTMVKESTGDIQRMHKLQLLGEGQVPFYNGCNPLALEAF VAGATGWCTAAANLIPELNLRLYQAVQSGELEQAKALFYRQLPLLDFILKGGLPATIKAGLEMTGLPVGEPRRPVFGLDAEGRDKLKTLLDALRQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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