Pseudomonas sp. CCOS 191, CCOS191_RS12460

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01130
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psec00300 Lysine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psec00261 Monobactam biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psec01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psec01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psec01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psec01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psec01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00408 DHDPS-like - - 8 290 7.79569E-102
SUPERFAMILY SSF51569 Aldolase - - 2 293 1.99E-85
SMART SM01130 DHDPS_2 IPR002220 DapA-like 4 294 1.2E-102
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 107 123 6.1E-11
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 132 149 6.1E-11
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 5 292 3.4E-58
PIRSF PIRSF001365 DHDPS IPR002220 DapA-like 1 296 1.2E-83
PANTHER PTHR12128 DIHYDRODIPICOLINATE SYNTHASE IPR002220 DapA-like 4 292 4.6E-58
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 75 93 6.1E-11
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 4 295 9.9E-90
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 39 60 6.1E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.