Pseudomonas sp. CB1, TD31_RS13490

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCAACGACGACAACCCCAGCGTCACTGACCGCTTCGAGCTGTTCATTGGCGGACGCGAGATCGCCAACGCCTACTCGGAGCTCAACGACGCCGAGGACCA GGCCGAGCGCTTCATGCGCCAGGTGGCGGACAAGGACGCGGGCGACGATGAAGCCATGCACTACGACGCGGACTTCGTTCGCGCCCTGGAATACGGCATG CCGCCAACCGCGGGCGAGGGCATCGGTATCGATCGCCTGGTCATGCTGTTGACCGACTCGCCGTCGATCCGCGACGTCATTCTGTTCCCGCACATGCGCC CCCAGGCCTGATCCGCTCGGTAGGAAGGGGGCGAAGCTCCCGAATGCGGGGTAGCGGCGTTCGCGAGCTCCGCCCGCTTCCTACGGTCGGGTATCTTCCC CAGAGAAAACGTCTGCACGTCCTTCGGATTGAGGCAAAATAGCCGGCGCGGCCTGGAGGTTCCAGGCCAGCTCTGGATTGCTTCAACAAAAGGATCAGAA
DNA Sequence for Gene
>TD31_RS13490
GTGGAACCCGCTACCCTTACAATCGGAGCCGCCGGCGTTGCCAGCGCCGTGGCCAACAGTATCCAGTATGAAGGTCGCAAGCCCACGCGGGAGGGCAGCG AGCAGCGCCGCCAGGCGATTCTCGACGCCGCCATGCGGATCGTCGTTCGCGATGGGGTTCGTGGCGTGCGTCACCGTGCGGTGGCGGCCGAGGCCGGGGT GCCGTTGTCTGCCACTACCTACTACTTCAAGGACATCGAAGACCTGCTGGCCGACAGCTTTGCCCGTTACGTGGAGCGCAGCGCCGCCCATATGACCAAG CTCTGGGCCAACAGCGAGGAACTGCTGCGCCAATTGCTGGCGGCCACCGACGATACGCCAGAAGCCAGAGGTCGCCTGGCCGATGCCATCGCCCGCATGA CCGCGGACTACGTACGTAAGCAACTGCATACCCGCCGTGAGTACCTGATGGCTGAGCAGGCGTTTCGCCAGGAAGCCCTGCTGACGCCCCGGCTGGCCGG CCTGGTGCTTTCCCACCAGCGCATCCTCCATGAAGGTGCCTGCCAGATGCTGCGTGTGCTGGGCTCCCGCTCACCCGAGCAGGACGCGCAGGTGTTGACG GCGCTGATCGGACAGTTGGAATATCAGGCACTGCTGGCGCCCGCATCGCAAGCTCACGCGGGGCATCAGGATGCCGGCATGCTCGACATACTTACCCGGT ACATGCACCTGGTGCTGGCCGCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGAGAACCGCCCGGATGAACCTCTGGCGCCCGCTGTTCATGCTTGTACTCCTGGCATCGCTCAGCGGGTGCCTTGCCACCTTCGACGAACCTATCGCCC CCGGGCAGAAAGCGCCGGCTGGCCTGATGGGCCACTGGCGCGCGCGGGATGCCTTTGGCAATGCCCTCAGGCTAAGCCTGCGGCCCGCGCCCGGCGGGCG CTACACCGCCATCAACTACCAGAAGGGCAGCGCCGGGCCGCGGGATGAAGTGACTTTCACCGTGACCCGCCATGGCGGCCGCTGGTATGCGTCCGCGCCC ATGCCAAAGGCCTATGGCGGCCGCTTTGCGCTGGTCGGTTTCGAATTGAGCGGGGAAGGCGAACTGGTGGTCTATAGCCTGGATCTGCAGCGCCTGCAGC AGGCCATCAGCCAGGGCGCCCTGGCCGGCGACCGTTTCGAGACGGAAGAAGGGCAGGGCGTTGCGATACGCTCTACGCCCGCCCAGGTATTCGCCTGGCT
Amino Acid Sequence
>TetR family transcriptional regulator
MEPATLTIGAAGVASAVANSIQYEGRKPTREGSEQRRQAILDAAMRIVVRDGVRGVRHRAVAAEAGVPLSATTYYFKDIEDLLADSFARYVERSAAHMTK LWANSEELLRQLLAATDDTPEARGRLADAIARMTADYVRKQLHTRREYLMAEQAFRQEALLTPRLAGLVLSHQRILHEGACQMLRVLGSRSPEQDAQVLT ALIGQLEYQALLAPASQAHAGHQDAGMLDILTRYMHLVLAAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site