Pseudomonas sp. AAC, FG99_RS04235
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. AAC Scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCGCTCGGAGAGTTCGCCCCACGGCGACATCGCCATCGAGTTCAGTGGCTTGCGTCCCGGCGAGAAGCTCTACGAGGAGCTGCTGATCGGCGACGAGGT AGGCGCCACCGAGCACCCGATGATCATGAAGGCGAACGAGGAAATGCTGCCCTGGGAGGCGTTCAAGACGGTGTTGGTCTCGCTGCTGAAGGCGGTGGAG CGGGGCGACTACGCCCAGGTGCGCATGCTGCTGCGCGAGACGGTCAACGGCTACTGCCCGGATGGCGATATCGTCGACCTGGTCCACCAGCAGCGCCGGA TGGAGCCCTGACAGATCAAGGTCGGTGCTCGGTCGGACGCTGCCTTGTTGCAGGAGGGGCTCTTCGTCCAATCGGCGAGGAAGCCCCTGATTCATTCAAA GTGTGATTTTCCCTTCTTCCCCTTGCCCCGCTCCTGTCGCTAAAGGTGAATGGCGAGCCCGTTCTGGCTCGCCATACCCAGTGACTAAAAGGAGTTATTC
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| DNA Sequence for Gene |
>FG99_RS04235
ATGCATAAGGCATTCGCGCTACTGCTGGTCGTGCTTTCCTCCCTTTCCCTGTCGGGCATGGCTGCCGCCGCTCCCGCGCCGGAGAAGCTGACGCCGGCGA CGGTCACCGTGCACGACGAGCAGGAAGGGCTGGTCAGCCTCAACACGGCGGACGCAGAGACGCTGCAAAAGCGGCTCAAGGGGATCGGCAAGGCCAAGGC CGAAGCAATAGTGGCCTATCGGCAGGCCAATGGCCCCTTCACCAGCCTGGATCAGTTGCTGGAAGTGAAGGGCATCGGCAAGGCGATCCTGGAAAGCAAC CGGGAGGCGATCAGTCTCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCACTCCGCGATGGAAAGGCCGGTCCGGGTGACCGGCCTTTTTTCGTTGCGCAGGCGGGATGACGCTTGACCCTGGCCAGCAGTGGGCATGGGGCGATC ACCCTGCAGGGACAGGCCGAGGGTGTCTGGCGCTGGAGGCGTCCAGGCGACGAACCAGTGCTGTTCTCAGGGCAAGCAGAGAGCCTGCACCGGCGGGCTC GGGGTTGATGTCTGCGGGAGAGATGGGACGGGAGAGGCCGCTCTTGGCAGATGGCCGGCTCTCGATCTAGAATCTCCCGATATGGGAGAAGTGAGGCAGA TGCGAGTTATTGCAAAGAGCACGCTGGTGAAGTTCTGGGGGATTCCTGGCCAGGAAGATACCAAGGCCCCTTTGGAGAGTTGGTACGACGCGGCGATCAA TGCTGAATGGAAGACTCCGCAGGGCGTGAAGAATCAATTCGGCAGCGCGAGCATCTGCGGCAACAACCGCGTGGTGTTCAACATCGGCGGCAACAAGTAT
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| Amino Acid Sequence |
>competence protein ComEA
MHKAFALLLVVLSSLSLSGMAAAAPAPEKLTPATVTVHDEQEGLVSLNTADAETLQKRLKGIGKAKAEAIVAYRQANGPFTSLDQLLEVKGIGKAILESN REAISLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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