Pseudomonas sp. AAC, FG99_RS04235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00278
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00278
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47781 RuvA domain 2-like IPR010994 RuvA domain 2-like 31 106 2.78E-28
PANTHER PTHR21180 ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1 - - 35 105 8.7E-17
Gene3D G3DSA:1.10.150.280 - - - 32 107 4.9E-22
SMART SM00278 HhH1_4 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 84 103 14.0
SMART SM00278 HhH1_4 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 53 73 100.0
NCBIfam TIGR00426 JCVI: competence protein ComEA helix-hairpin-helix repeat region IPR004509 Competence protein ComEA, helix-hairpin-helix domain 39 105 4.5E-23
Pfam PF12836 Helix-hairpin-helix motif - - 42 103 5.4E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.