Pseudomonas sp. 21, UB43_RS17935

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACATGGACTTCGCCAACGGCTTCCACCTCACCCAGCACATCGGCCCGAACTACCTCGGTGGCCAGCTCGACAGCGACGCCCGCACGGCCATCCACATGAC CCACCGCATGGGCGCGCTGTGCGTGACCGCGGTGATCCTGCTGCTGGCCTGGAACCTCCAGCGCCACGGCCTGATCGGCATCACCGCACTGATGCTGCTG GGGCTGTCCTTCCAGATCGGCCTGGGCATCAGCAACGTCCTGCTGCACCTGCCGCTGCCGGTGGCGGTGGCGCACAACGGCGGCGGCGCGTTTCTGCTGC TGATGCTGGTGCTGGTGAACTACCGGGTGCGCGCACCCGCGGCGAAGCACGTCGAGCTGCCCGCCAGCAGCCCGATTGCCCTGGACGCCCTGGAGCGCCC GGTGGCCTATCCCTCGCAGGGATGAGATTGCACGGTTGAGCACGACGGCCGGCCGGCGCCAAGGCGCGCCGGCCCCCATTCACCCGATGGAGAAATACCC
DNA Sequence for Gene
>UB43_RS17935
ATGGCCAGCGTCATCAGCACTTCCAGCCAAGCCAGCTGGCGCGACCTGCTCGAACTGACCAAGCCCAAGGTGGTCCTGCTCATGCTGATCACCTCGCTGA TCGGCATGCTGCTCGCCACCAAGGCCGGCGTGCCCTGGCAGGTGCTGGTCTTCGGCAACCTTGGCATCGGCCTGTGCGCCGGCGGCGCGGCGGCGGTGAA CCACGTGGTGGACCGGCGCATCGACTCGATCATGGCGCGCACGCACAAGCGCCCGCTGGCCGAAGGGCGCGTTTCACCGCCCATCGCGCTGGGCTTTGCC ATGCTGCTGTCGGTGGCCGGGATGGCGGTGCTGCTGGTGTTCACCAATGAGCTGACGGCCTGGCTGACGCTGGCTTCGCTGCTGGGCTACGCGGCGCTCT ACACCGGTTTCCTCAAGCGTGCCACGCCGCAGAACATCGTCATCGGCGGCCTCGCCGGCGCCGCCCCGCCGCTGCTGGGCTGGGTCGCGGTGACCGGGCA GGTCTCGGCCGAACCGCTGCTGCTGGTGCTGATCATCTTTGCCTGGACGCCGCCGCACTTCTGGGCGCTGTGCCTGCACCGCAAGGACGAATACGCCAAG GCCGATATCCCGATGCTGCCGGTGACCCACGGCGAGCACTACACCAAGCTGCACATCCTGCTCTACACCCTGGTGCTGTTCGCCGTGACGCTGATGCCCT TCGCCATCCACATGGCCGGGCTGGTCTACCTGTTCGCCGCACTGGCCCTGGGCGCGCGCTTCCTCGACTGGGCCTGGGCGCTCTACTGCGGCAGCCGACC CCATGCGGCAATCAAGACCTTCAAGTACTCTATTGCCTACCTGTTCCTGCTGTTCATCGCGCTGCTGGTGGACCACTACCTGCCGCTGCACCTGAACTAC TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCGGTTCGCGAGCAAGTTAGGAGCGAACTTGCTCGCGAAGCCCTTGGCTTCACTCCAGACGTCCCGACCCACGAGTAGCCCATGACCCGAGTCAACAA GACCGTCTTCATCCTCGTCGCCATCGTTGCCGTGATCCTCGGCCTCACCGTCCAGAAGGTGCTCAACCAGCGCCACCAGCTCGACCCGACCGTGCTGCTC GACGCCGGCATCGTGATCCTCCCGCAAACCCGCAGCGTCCCCGACCTGACCTTCACCGACCAGGACAGCCAGCCGTTCCAGACCGCCAGCCTGAAGGAGA AGTGGTCCCTGCTGTTCTTCGGCTACACCTTCTGCCCGGACGTCTGCCCCACTACCCTGGCGCAACTGCGCGAGCTGCAGACCAAGCTGCCGCCGGAAGT GGCGAAGAACCTGCAGGTGGTGTTCGTCAGCGTCGACCCGCACCGCGATACCGCGCCGCGCATCAAGGAATACATCGGCTTCTTCAACGCCGGCTTCAAG
Amino Acid Sequence
>protoheme IX farnesyltransferase
MASVISTSSQASWRDLLELTKPKVVLLMLITSLIGMLLATKAGVPWQVLVFGNLGIGLCAGGAAAVNHVVDRRIDSIMARTHKRPLAEGRVSPPIALGFA MLLSVAGMAVLLVFTNELTAWLTLASLLGYAALYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVTGQVSAEPLLLVLIIFAWTPPHFWALCLHRKDEYAK ADIPMLPVTHGEHYTKLHILLYTLVLFAVTLMPFAIHMAGLVYLFAALALGARFLDWAWALYCGSRPHAAIKTFKYSIAYLFLLFIALLVDHYLPLHLNY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site