Pseudomonas sp. 21, UB43_RS17935

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01040
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd13957
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008495 protoheme IX farnesyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd13957
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006783 heme biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd13957
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.357.140:FF:000001 Protoheme IX farnesyltransferase - - 20 174 1.4E-55
CDD cd13957 PT_UbiA_Cox10 IPR006369 Protohaem IX farnesyltransferase 17 287 1.25922E-109
Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. IPR006369 Protohaem IX farnesyltransferase 12 293 19.670191
PANTHER PTHR43448 PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL IPR006369 Protohaem IX farnesyltransferase 8 291 1.2E-79
Pfam PF01040 UbiA prenyltransferase family IPR000537 UbiA prenyltransferase family 29 281 6.2E-60
Gene3D G3DSA:1.10.357.140 UbiA prenyltransferase IPR044878 UbiA prenyltransferase superfamily 19 176 4.3E-34
NCBIfam TIGR01473 JCVI: heme o synthase IPR006369 Protohaem IX farnesyltransferase 15 292 4.2E-102

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.