Pseudomonas sp. 21, UB43_RS26010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACAGGGAAATGTTCTTGAGGATTTCACGCTTGGGCGGCACGACCTTGCCGACCCGGTGCATGGTGTAGACGTATTGAGCCATGGATACCTGACTTCTGG GATGAATTGTGATCGGGATGGCCGGAACGCACGATGGCAGGTTCCGGGACGCCGGCTCACTGGCCGGAGCGGCAGCGCTCGAACTCTCGCGAGCGGGCTG CCGGCGGGCGTGAACGGCCGATGGACGGCCCTTCGCGCGGGACTCTGCGGGGATGTACTTTATGCGTCGAACTTTTCGCTGCACATCACGCGCGCGTGCG GCAAAGCTACCGGAATGAACCGGGAAGGGCAAACGACGCTCGTCGGCCATACTGGCACTTCGCCGCCTTTCCGGGCATCCTAGCCTGCGCCGAATTCAGC CGTATCGCCCCAGGTCCCTAAGTCCTTGTCTATTTTCCCCCGTACTCCTCCGGACGCCCTGGCCAGGCCTGGCCGCGTGGCGACCCGGACCGCGCTGGTG
DNA Sequence for Gene
>UB43_RS26010
CTGCTGGTGCTGTTCATGCTCGGCCTGCTGGTCTGGCAGCTGCACCAGGAGTTCCGCAGCCAGGAGCGCTTCGAGCGTGAGCGGGTGGTGCTGCACGGCG AACAGATGGCCCAGCGGATCTCCCTGACCCTGGAACTCAAGGCCGTGGCGGCACAGGCCCTGCTGCAGCAGGAACAGGACCGCGAGCACGGCGATGTCCA CGCACCGCTGATCGCCGGCCTGAAGCACATCTACCCGTCCTTCCACAGCCTGGTCCGGCTGGACGCCAGCGGCGCGCCCGTGCGCGACTCCGCCAGCGGC ATCAAGGACGTCGCCTTCATCGAGGCCTTGCGCCAGCGCAGCACGCAACAGGCCTATCACTATGCCTTCAGCGAGGAGAACGGCGGCCACTTCTATGTCT GGCTGAAGGCCACCGAGCCGGGCGAAGGCGACAGCGTCATCCGCCTCGACGAAAAGGTCGCCCGGCGTGGCTGGGCGGCGCAGATCCGCCCCGAGTCACC GGACTGGATCCTGGTCGACGACGTCCAGCAGAAGGTCCTCGGCCGCTCCAGCGGCTATCGTCCCGGCCCGCTGTCCGCCGCCTCGCCACTGGAACAGGCA CGGAGCCTGGACGGCCTGGACATCCAGAACACCGACTGGCAGTTGCACCCGCAATTCGACGACCGGCAGATCCGCGCCACCCTGTTGCCGCGCCTGGGCG GCGAGCTGGCGCTGCTGCTGGTTCTGGCGGGCATCGCCGGCGCCGCCCTGCTGCGCCTGCAACGCGAACAGCAGAACCTGCGCGCGCTGACCGTGGAGTC GCAGCAGAACCTGCGTCAGGCCGCGCAAGCCCTGGGCGCCATCGACGAGCGGGTGCTGGTGACCCGCACCGACGGTCGCCTCGCCTACCTCAACCCACAG GCCGAGCAGCTATTCGGCATCACCGCCGACAAGGCCGGCGAACATCACCTGCTGGAGCTGCTGCCCGGCCTGGGTGGCCTGCTGCAGGGCGGCGATGCCG CGGCGGACAACGGCTCCGAGCTGGTACGCGTCAACGATACCGGCCAGGCCCGGCTGTTCGCCGTCAGCCAGCATTCCCTGGACGACAGCCCGCTGTCGCC GGAGCAGACCTGGGTGCTGCGCGGCAACCTGCCCCAGGGCGGGCAGGTCTGGGTGCTGCGCGACGTCACCGAGGAACAGCAGGCGCTGCACATCCTCGAA GAGACCCGCCGGCGCTACCAGGACATCTTCGACGGTGTCGGCGTCGCCCTCTGCGTGCTCGACCTCTCTGCCCTGCGCCAGGCCCTGGTGGACCTCAACC TGCGCCGGCAGAGCGACCTGCGCGAGTGGATCACCTCACAGCCCGAGCGTCTGCCCTGGCTGCTGCGCCAGGTGCGCATCACCGAGATCAACAATGTCGC CAAGCGCCTGATGGGCGTGGGCACCACCGAGCAGGCCTGGCAGATTCTCATCGGCGGCGCCGGCATGCGCCCGGACGGCGTGCGCAGCAAGGTGCTCGAA GCCGTGCTGCACGGCCAGGGCATGGTCGAGCTGGAAGCCTGCATCCATACCCGCCAGGGCGAACAGCGCCACCTGTGGCTGCAATTGCGCGTGCCGGAGA TGATCCAGGACTTCCACGCCGTCACCCTGAGCCTGTCGGACATCACCAGCCGCAAGCAGGTCGAACTGTCGCTGATCGAGCGCGAGAAGTTCTGGTCCGA CGCGGTGCGCGCGGTGCCCGACACCCTCTACATCCACGACATCGCCGCGCGCCGGGTGATCTTCAGCAACCACAACCTCGGCCACCAGCTCGGCTACAGC GGCGACGAACTGCGCGAGATGGGCGAGCGCTTCTGGGAGAAGGTGCTGCACCCGGACGACGTCGAGTACTACTGGCGCGTGCGCAACCTGCAGCAGGTGG TGGGCGACGGCCTTTTGCTGGACAGCCAGTTGCGCTGGCGCCACCGCGACGGCAGCTGGCACTGGTTCGATATCCGCGAGCAGGCCTTCACCCGCGACGC TTCCGGCCGCGTGGCGCGGCTGATCGGCGTGGCCAAGGACATCACCGACACCGTCGAGGCACACAACTCCCTGCGCGAGAGCGGCCGTCGCTACCGCATG CTCGCCGAGAGCATCAGCGACGTGATCCTCTCCACCGACGCCCAGGTCAAGCTCAACTACATCAGCCCGTCGATCCACCAGGTGCTCGGCTACAGCCCCG AGTGGGTGCTGGCCAACGGTTTCCAGCAGGTGGCCGCCAACCCGGCTCAGCTGGAGCGCCTGGATGAACTGCTGAACCGCGTGCAGGGCGCCATCGGCGA GCCCAAGCGCCTGGCCGAACTGCGCGAGAGCGCCGAGCCGCAGCTGTTCAGCCTCGACTGCCTGCACGCCGACGGCCACAAGATTCCCGTGGAGCTGCGC ATCGCCCTGATGTGGGACGACCACGGCCGCTTCGAAGGCCTGCTCGGCGTCGCCCGCGACGTGAGCCAGCAGCGTCGCGCCGAGCGTGAGATGCGCATGG CGGCGACGGTATTCGAGCACTCCACGGCGGCGATCATGGTCACCGATCCGGCCGGCTACATCGTGCAGATCAACGACTCCTTCAGCCGCCTCACCGGCTA TTCCGCCGAGGAAGTGCTGGACCAGCTGCCGCGCCTGCTCACCGCCGACCGCCAGGAAGCCAACCAGCTCAAGCACGTGCTCGAAAGCCTGCGCAAGAGC GGCAGCTGGGAAGGCGAGATCCTGCAGAAGCGCAAGAGCGGCGAGCTGTACCCGAGCTGGGTCGGCATCACCGCGGTCCACGACGAGGAAGGCGACCTGG TCAGCTTCGTCTGCTTCTTCAGCGACATCAGCGAACGCAAGGCCAGCGAGCGGCGCATCCACCGCCTGGCCTACTACGACGCCCTGACCCACCTGCCCAA CCGCACGCTGTTCCAGGACCGCCTGCACACCGCCCTGCTGCAGGCCGAGCGGCACCAGCAGTGGGTCGTGCTGATGTTCCTCGACCTCGACCGCTTCAAG CCGATCAACGACTCCCTCGGCCACGCCGCGGGCGACCGCATGCTCAAGGAAGTGGCCGAGCGCCTGAGCCATTGCGTCAGCGACGACGACACCGTGGCGC GCATGGGCGGCGACGAGTTCACCCTGCTGCTGCCCGGCCAGAAGGACCGCGAGAAGGCGCTGCGGCAGGCGATCCAGGTCGCCGAGCAGATTCTCTCCAG CCTCGCCCGCCCCTTCACCCTGGAAGGGCGCGAATTCTTCGTCACCGCCAGCATCGGCGTGGCGCTCTCGCCGCAGGACGGCGCCGAGCTCAGCCAGTTG ATGAAGAACGCCGACACGGCGATGTACCACGCCAAGGAAATGGGCAAGAACAACTTCCAGTTCTACCAGGCCGAGATGAACGCCCGCGCCCTGGAACGCC TGGAGCTGGAAAGCGACCTGCGCCGCGCCATCGAGCTGCACGAGTTCGTCCTGCACTACCAGCCGCAGTTCACCGGCGATGGCCGTCGCCTGACCGGTGC CGAGGCGCTGCTGCGCTGGCAGCATCCCAAGCGCGGTCTGATCCCGCCGGCGGAGTTCATCCCGGTACTGGAAGAGCTCGGTCTGGTCGCCCAGGTCGGC GACTGGCTGCTGGAGCAGGCCTGCCTGCAACTGCGCGCCTGGCACCGCGACAAGGTGCGGGTGCCGAAGATTTCCGTGAACCTCTCGGCCCGGCAGTTCG CCGACGGCCAGTTGGGCGAGCGCATCGCCGGCATCCTCGAGGACACCGGGATCGCCCCGGCGTGCCTGGAGCTGGAGCTGACCGAAAGCATCCTGATGAG CGACGTGTCCCAGGCCATGCAGATACTTCAGGGCCTGAAGCGCCTGGGCCTGGCGATTGCGGTGGACGACTTCGGCACCGGCTATTCCTCGCTCAACTAC TTGAAGCAGTTCCCCATCGACGTACTGAAGATCGACCGCAGCTTCGTCGACGGCCTGCCCCATGGCGAGCAGGACGCGCAGATCGCCCGCGCCATCATCG CCATGGCCCATAGCCTGAACCTGATGGTGATCGCCGAGGGCGTGGAGAGCCACGAACAGCTGGACTTCCTGCGCGAGCATGGTTGCGACGAGGTGCAGGG CTTCCTCTTCGGCCGCCCGGTGCCGGCGGACCAGTTCGCCGCGCTGTTCGCCAGCAACGCGTTGTTCCTGCTGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCATCGGCTCGATGTTCGGCTTTGCGTAGGAGCGGGCTCCGTCCGCGATGTGCCACCGGCCAGCTCGGAGCCGCCGGGGATCGATCGCGGACGGAGTCC GCTCCCACACACGCCGCACCGCCTCCGCAAGCGCCAAGCTGCTCGCAAATCCACCGATCCGCCGCCTTGAACCCCGCTTGTCAGCCACATGACCGCCTTT CATGTGCCAGCACCGGCGCCTTGGGTTAGAATGCGCGCCTTTCCCCCAGCACCCGATCCTTAAGAGGACCGCCATGTTCAGCCGTGATTTGACCCTCGCC CGCTACGATGCCGAACTCTTCGCCGCGATGGAGCAGGAAGCCCAGCGCCAGGAAGAGCACATCGAGCTCATCGCCTCCGAGAACTACACCAGCCCGGCGG TGATGGAAGCCCAGGGTTCGGTGCTGACCAACAAGTACGCCGAAGGCTACCCGGGCAAGCGCTACTACGGTGGTTGCGAGTACGTCGACGTCGTCGAGCA
Amino Acid Sequence
>diguanylate cyclase
MLVLFMLGLLVWQLHQEFRSQERFERERVVLHGEQMAQRISLTLELKAVAAQALLQQEQDREHGDVHAPLIAGLKHIYPSFHSLVRLDASGAPVRDSASG IKDVAFIEALRQRSTQQAYHYAFSEENGGHFYVWLKATEPGEGDSVIRLDEKVARRGWAAQIRPESPDWILVDDVQQKVLGRSSGYRPGPLSAASPLEQA RSLDGLDIQNTDWQLHPQFDDRQIRATLLPRLGGELALLLVLAGIAGAALLRLQREQQNLRALTVESQQNLRQAAQALGAIDERVLVTRTDGRLAYLNPQ AEQLFGITADKAGEHHLLELLPGLGGLLQGGDAAADNGSELVRVNDTGQARLFAVSQHSLDDSPLSPEQTWVLRGNLPQGGQVWVLRDVTEEQQALHILE ETRRRYQDIFDGVGVALCVLDLSALRQALVDLNLRRQSDLREWITSQPERLPWLLRQVRITEINNVAKRLMGVGTTEQAWQILIGGAGMRPDGVRSKVLE AVLHGQGMVELEACIHTRQGEQRHLWLQLRVPEMIQDFHAVTLSLSDITSRKQVELSLIEREKFWSDAVRAVPDTLYIHDIAARRVIFSNHNLGHQLGYS GDELREMGERFWEKVLHPDDVEYYWRVRNLQQVVGDGLLLDSQLRWRHRDGSWHWFDIREQAFTRDASGRVARLIGVAKDITDTVEAHNSLRESGRRYRM LAESISDVILSTDAQVKLNYISPSIHQVLGYSPEWVLANGFQQVAANPAQLERLDELLNRVQGAIGEPKRLAELRESAEPQLFSLDCLHADGHKIPVELR IALMWDDHGRFEGLLGVARDVSQQRRAEREMRMAATVFEHSTAAIMVTDPAGYIVQINDSFSRLTGYSAEEVLDQLPRLLTADRQEANQLKHVLESLRKS GSWEGEILQKRKSGELYPSWVGITAVHDEEGDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALLQAERHQQWVVLMFLDLDRFK PINDSLGHAAGDRMLKEVAERLSHCVSDDDTVARMGGDEFTLLLPGQKDREKALRQAIQVAEQILSSLARPFTLEGREFFVTASIGVALSPQDGAELSQL MKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRAIELHEFVLHYQPQFTGDGRRLTGAEALLRWQHPKRGLIPPAEFIPVLEELGLVAQVG DWLLEQACLQLRAWHRDKVRVPKISVNLSARQFADGQLGERIAGILEDTGIAPACLELELTESILMSDVSQAMQILQGLKRLGLAIAVDDFGTGYSSLNY LKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESHEQLDFLREHGCDEVQGFLFGRPVPADQFAALFASNALFLLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site