Pseudomonas sp. 20_BN, BN1079_RS10450
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 459 | 626 | 1.0E-56 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 466 | 622 | 6.0E-46 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 471 | 624 | 1.33E-47 |
| Coils | Coil | Coil | - | - | 298 | 318 | - |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 455 | 626 | 4.0E-57 |
| Coils | Coil | Coil | - | - | 406 | 465 | - |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 193 | 626 | 2.2E-73 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 467 | 623 | 4.44378E-57 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 461 | 626 | 5.4E-51 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 464 | 625 | 2.1E-46 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.