Pseudomonas sp. 12M76_air, VG99_RS12190
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 12M76_air. [Details] | |
| DNA Sequence Upstream of Gene |
CAACAACGCAGCCCAGGTCTGGAACCACACCTTCTACTGGAACTGCCTGAGCCCCAACGGCGGCGGCGAGCCCACCGGCGAACTGGCCGAGGCCATCACC AAGGCGTTCGGTTCCTTCGACGCATTCAAGGAAGAGTTCAGCAAGGTTTCCATCGGCACCTTCGGCTCCGGTTGGGGCTGGCTGGTGAAGAAGCCCGACG GTTCCCTGGCCCTGGCCAGCACCATTGGCGCCGGCAACCCGATCACCTCCGGCGACACTCCGCTGCTGACCTGTGACGTCTGGGAACACGCCTACTACAT CGACTACCGCAACGCCCGTCCGAAGTACGTCGAGGCGTTCTGGAACCTGGTCAACTGGGACTTTGTAGCGAAGAATTTCGCCGCCTGAGCCTGATGTAGC AAAAACACCCCGCCCTGTGCGGGGTGTTTTGTCTTGGGCTGTTGCGCCGCGTCAGTTAGGGATGCATGATGCGGTAAACAACGAAAAAGGAAGACGCGCG
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| DNA Sequence for Gene |
>VG99_RS12190
TTGAAAGTGGACCGCCGACACAGTCTTTCCATCAAGCTGTTGAAACTGGTGTTGCTGTGGGCATTGTTGGCAGGCATGGCGCTGAGTCTGGCGCAGATCC TGTTCGACCTGCGTCTTGAGCGAGAAGCCATCCGGCAGGATGCCACCCAGATTCTGGCAATGTTCCGCGATCCGGCGAGCCAGGCGATCTTCAGTCTGGA CAAGGAAATGGCCACCCAGGTCATTGAAGGCCTGTTTGCCAACCCCGCCGTGCACTTCGCCGCCATCGGCCATCCCGGCGAGGAGCCCCTGGCCAGTCGC GAACGCCCGCTCAGCACCCCACCCTACCGTGTCCTCACTGACCTGCTGTTCGGTGTCGAGCAGAGTTTCAGCACACCCCTGCGGGGCCGCGAGCCCTACA ACGAATACTACGGCGAATTGCAGCTGACGCTGGAGACGGCCCCCTATGGCCAGACCTTTCTCCGCTATTCGCTGATCATCCTGGCGTCCGGACTGCTCCG CGCCCTGGCGATGGCCGGTGCGCTCTATCTGATTTACCACGTTCTACTTACCCGGCCGCTGGCACGCATCATCGAGCATACCGCGAGCATCAACCCAGAC CTGCCCGGCAAGATGATGATTCCGATGCTCCCCGGTCAGGAACGCAACGAGCTGGGGTTATGGATCACCAAGGTCAATGCCCTGCTGGAGGCCATCGAGC GCAACCGCGATCAGCGCCACGAAGCCGAAGCCAGCCTGCGCCATATGGCCCGCCATGATCAGCTCACCGGCTTGCCCAACCGCGGCCTGCTGCTGGAGCA ACTGGTGCGCGTGCTCGCCGATGCCAAGCGCCGCCAGCGCGGCGTTGCGGTGCTGTGCTGCGGGCTCGACGACTTCAAGGAGATCAACGACAAGTTCGGC TATCAGGCCGGCGACGGCATCCTGGTCGCAGTGGCCGAGCGACTGCAGTCGCACAGCGCCCGCCTGGTCAGCGTCGCGCGCCTGGGCGGCGATCAGTTCG CCCTGATCGTGGCCGATGTAGACGAGCCCTATGACGTTGCCGAACTGGCCCAGCAACTGCTGGATGAGCTGGCCCTGCCGTTCCCGGTCGGGGGACACCA GGTCACCACCGGCGCCACTATCGGCATCACCCTGTTTCCGGACGATGGCCTGGATGCGGGCAAGCTGTTGCAGAAGGCCGAGCAGACCATGATGCTGGCC AAGGCCCGCTCGCGTAATCGCTATCAGTTCTACATTGCCAGCGTCGACAGTGAAATGCGTGAGCGCCGCCAGCTCGCGGCGAGCCTGCGCAACGCCCTGC TGCGCAACGAGTTTCACCTGGTCTATCAGCCCCAGATCAGCCTGACCGACCATCGGGTACTGGGTGTCGAGGCGCTGCTGCGCTGGCACCATCCGGAGCG CGGCCTGATTCCCCCGGACCTGTTCATTCCCCTGGCCGAACAGAGCGGCGCCATTATCCCCATCGGCGAATGGGTACTGGATCAGGCCTGCCGCCAGCTG CGTCAGTGGCAGGACGCTGGCCGCACCCAACTGCGCATGTCGGTCAACCTGTCCACGGTCCAGTTGCACCACCCCGACCTGACAGAAATGGTCACACAGG TGCTGCAACGCTACGATCTACCGCGCGACAGCCTCGAGCTGGAAGTCACCGAAACCGGCCTGATGGAAGACATCCATGCGGCCGCCCGACATCTGCACAA GCTGAAAAGCATTGGCGTGTATATCGCCCTGGACGATTTCGGCACTGGCTACTCGTCCCTGAGTTATCTGCGCCGACTGCCGCTGGACAAGATCAAGATC GACAAGAGCTTCACCGGTGACCTGCTGACCGACCCCGATGATCGCACCATAGTGCGGGTCATTATCCAGCTGGGGCACAACCTCGGCATGCAAGTCATTG CCGAAGGGGTGGAGCTGGCGGAACAGCAGGCCTATCTGAGCCAGGAGGGCTGCGATGCGGGGCAAGGTTATTTCTACAGCCCGCCACTGACCGCTGCCGC ATTGACCGGCTGGATCGACAACTACGAGCGTCAGCACCACCAGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCCGCGTGGGCGCCCTGTAATGAATCAGCGCAATAGGGCCAACCACAGCCAACCGGCGACAGCCCCGGCAACGATCATCCCCGCCATGCTCCAGCCCGA TTGGCGCCGCAACCTGCGGCCGAGGTCTTCCTCATGGTGATCGGATAGCAGAAAGGGCAGCCCTTTGTGCGGCGGCCTGGCCAGGGTATGCACCACGGGC TGCGTACTCTCGCGGCGCATCTGCTGCTGGGCTTCGACCGCCGCCGCGGCGCGGACCCGTTCCCATTCTACCGCGTCGAGCTGACCGTCGGCGTTACGGT CAAAGCGCGCCAGCAGACTCGGATAGTCGGCCTTCCAATCGCTGATGATCCGCCGCGCCAACGCCTCAGGCGCCCTGGCATCACGGCCGCCGCCGCGGCT TTCGAACCAGCCCAGGGCGTAGAGTTGATCGTCCTCCTGCAACCACTCCTCGGTATAGCGGTAACGGCGCCCGAGCAGACCGAGCACACCCGTCGGAGCC
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| Amino Acid Sequence |
>diguanylate cyclase
MKVDRRHSLSIKLLKLVLLWALLAGMALSLAQILFDLRLEREAIRQDATQILAMFRDPASQAIFSLDKEMATQVIEGLFANPAVHFAAIGHPGEEPLASR ERPLSTPPYRVLTDLLFGVEQSFSTPLRGREPYNEYYGELQLTLETAPYGQTFLRYSLIILASGLLRALAMAGALYLIYHVLLTRPLARIIEHTASINPD LPGKMMIPMLPGQERNELGLWITKVNALLEAIERNRDQRHEAEASLRHMARHDQLTGLPNRGLLLEQLVRVLADAKRRQRGVAVLCCGLDDFKEINDKFG YQAGDGILVAVAERLQSHSARLVSVARLGGDQFALIVADVDEPYDVAELAQQLLDELALPFPVGGHQVTTGATIGITLFPDDGLDAGKLLQKAEQTMMLA KARSRNRYQFYIASVDSEMRERRQLAASLRNALLRNEFHLVYQPQISLTDHRVLGVEALLRWHHPERGLIPPDLFIPLAEQSGAIIPIGEWVLDQACRQL RQWQDAGRTQLRMSVNLSTVQLHHPDLTEMVTQVLQRYDLPRDSLELEVTETGLMEDIHAAARHLHKLKSIGVYIALDDFGTGYSSLSYLRRLPLDKIKI DKSFTGDLLTDPDDRTIVRVIIQLGHNLGMQVIAEGVELAEQQAYLSQEGCDAGQGYFYSPPLTAAALTGWIDNYERQHHQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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