Pseudomonas sp. 11/12A, GQ39_RS06535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. 11/12A
GCF_000800055.1|latest |
| Locus Tag |
GQ39_RS06535
|
| Name |
|
| Replicon | contig_1 |
| Genomic location | 1405620 - 1407230 (- strand) |
Cross-References
| RefSeq | WP_047528310.1 |
| GI | 835500334 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
microcin ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 12.17 |
| Kyte-Doolittle Hydrophobicity Value | -0.026 |
| Molecular Weight (kDa) | 59.1 |
| Isoelectric Point (pI) | 9.31 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003590 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: GQ39_RS06535
Search term: microcin ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
4.3e-17
Percent Identity:
31.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
4.3e-17
Percent Identity:
31.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
4.3e-17
Percent Identity:
31.0
|
References
No references are associated with this feature.