Pseudomonas sp. 11/12A, GQ39_RS00785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 11/12A GQ39DRAFT_scf7180000000022_quiver_dupTrim_8682.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCGCCCCAGTGGCAGGCCGGCTATCGCGTAGACAAGGGTGAAGGCGGTGCCGATGATCCCCAACTGAAAGTCGCTGAGGTGCCATTCCATGCGGATCGG CTCAATGATGATGGCCGGGATCGTGCGGTCGAAAAAATTGAACAGATTGGCCAGGAACAGCAGGAACAGAATGCGCCAGGCATTCGCCGCTTGGGTCGAG TTCTGCATGGGTCCGTCTCTTTTATTGTTATGGGGCTTCACTGCCAGCGCATCCGAGCCCGGAACTTGCAATCTAGTCAGGCCCGCGAATGCTGTCTGTC ATTATTCGCAAGGCTGATACCCACCCATGGTGGCGGGCGCAGCCCATGCAACAATTTATTTCCAATCGCTCTAAAGCCCATTCCAAAAAGGTTGGGCCCA TTTAGCCACCATGGCTTGCGCTTCGTGCATGCCCTCTATACTTCAGTGCATTCGCCAGCGTCGATTGCGCAGGCCAGGGTGATTAACGACGGGGCATGCT
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| DNA Sequence for Gene |
>GQ39_RS00785
ATGGACTGGCTTGGTCTGCATTTCATTACCGAGCTACCAGTGAACGGGCAGGTCATACTTAACTGCATGCATGACCCCTTTCTGGTGTTACTGGCTTATC TGGTCGCCTGTGCCGGCAGTTTTGCCACACTGGACATGGCCGAACGGGTTGCCCACGCGGAAAACCTCTCCTCCCAACGACTGTGGCGCTGGGTCGGTGC CGGCTGCCTGGCCGGCGGAATATGGGCCATGCACTTTATCGGCATGCTGGCGTTCCAGGTGCCGGTCGATGTTCATTTCCAACTGCCCGTCACCTTGTTG TCCCTGTTGATCGCCCTGCTCACCTCCTGGCTGGTGATGTACACCCTCAGTCGCCCCTCCCTGAGCTTTTGGCAATGCCTGAAAGCCTCCGTCTGGATCG GCATGGGCATCGCGACCATGCATTACGTGGGCATGGGCGCCATGCAGTCGCAAGCGAAGGTCTATTACCAGCCAGTGTTGTTTGGGCTCTCCATCCTGAT TGCGATTGGCGCCAGCCTGGCGGCGCTGTTACTGGCCAGCCATTTGCGCAACGGCACCGGGATGTTTCATCAGTTGTTCAAATACAGCGCGAGCCTGGTT ATAGGGGCCGGCATCATCAGCATGCACTTTACGGGTATGGCGGCTTTCAATCTGTTGCTACCCGGCGGCACCGTCCTGCCGCAACCAGGGGAACACAACC ACCTGCAATTGGGGGTGACTGTCGCAGTCATGACGCTGCTCATCATTGGCAGCTGCATCAGCGCGGCCCTGGCGGACAAGAAACTGCAAAAAAAGGATCA TGACCTGCAACGGGTGAACTCGCTGCTCAGCCAACTCGACCAGGCACGCGTTTCCCTGCAACAGGTCGCGCACTACGACGCCTTGACCAGCCTGATCAAC CGACGCGGTTTCAATCAGATCTTCGCCGAGAAGCTCATCGAGAAAACCCATGAAGGTGGCATGCTTGCCGTCCTGTTCCTCGACATTGACCATTTCAAGC GGATCAACGACAGCCTGGGCCATGATGCGGGCGACGAACTGCTCAAGGTACTGGCCAGCCACATCAAGGCCTCGGTGCGCAGCCACGAAGATGTCGTGGC GCGATTCGGTGGCGATGAATTCTGCATCCTCATCGATCTGCACGATCGGGACGAAGCCCGACAAATGGCACAACGCATCATGCTGAAAATGAAGGACCCC ATCGAGCTGGCCGGGCGGCGCATGGTCATGACGACCAGCATCGGTATCAGCCTGTTTCCGGAGGATGGAAAAACCTGCGAAGAACTGCTGAAAAATGCCG ATTTGGCGCTGTATCAGTCCAAGGGCAGCGGTCGCAACGGCTTGAATTTTTTCAGCGCCAATCTCAAGGCCCGGGCCACGCTGGAACTGCAACTGGAAGA AGAACTGCGCCATGCCCTGCGCGAAGACACCGGCCTGATGCTCTATTACCAGCCAATCTACGACCTGAAAACCGGCCAGGCCAGCAAACTGGAAGCGTTG ATTCGCTGGCAGCATCCTGTCCACGGTTTCCTCGCACCGGATCGTTTCATTGCCCTCGCCGAGTCCAATGGCCTGATCACCGAACTGGACAAATGGGTGC TGCGCAAGGCCTGCCAGGACCTCGGCGAATTGTCACGACAGGGCTGCGATGAACTGAAGATTGCCGTGAATTGCTCGCCCCTGAGCCTGGTTCGCGAGGA ACTGGCCGGGGAAATCGAACAGGCCTTGCGCAGCGCCGCAGTGGCGCCAAGGCGGCTGGAACTGGAGGTGACTGAAAATGCATTGATGGGCAACATCACC GAAACGCTGGTATTGCTGCAGCAGATTCGCGCCCTCGGCGTGTCGCTGTCGATCGATGACTTCGGCACCGGTTACTCGTCCCTGGCCTACCTCAAGCGCT TGCCACTCAACACGCTGAAGATCGATCGATCGTTCATTATCGACATCCCCAAATCCGCCCAGGACATGGAGATCGTCCAGGCCATTATCGTCATGGCCCA CACGCTGCATCTGGACGTGGTCACCGAGGGCGTCGAAACGTTCGAGCAATACCAGTTTCTCGAACGCCACGGCTGTGACTTTGTTCAGGGGTACCTGCTA AGCCGCCCGGTGCCCCTCAATGATTTACGCCCGGTGCTGGACGAGATCAACCAGCGCAAGCACGCATACACCGTTACGCCGTTGAGTCTGGTTCACGGTA CAACTGCACTAATGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGGTCATGTTCCAGGAAGCCCTGGCTCCCATGCAATCGCATCAATTGCGCGGCCAGACCGCTGATCGGCGTTGCCGAGCCTTGCTCACGGGAAAACTT CACCGCGGTATCCAGATCCTTGAGCAGGGTTCGCACGTGCCATTTGACTGGTTCGAAACGGCTTTCGGCCATTTGCGGGCCGAGAATCTGCAAAGGTTTT GAGTCGGCAAAACCACCGGCCAGCGCCTCGGCGATCAGGCTCGCATCAACACCGGAGCGCTCCGCCAGCGCCACCACTTCAGCAATAACCAGCGCGTTGC AGGCCACGATCATTTGATTGCAGGCCTTGGTCACCTGCCCCGCCCCGACGGCCCCCATGTGCGTCACGCGCTGGCCAAGGCTCAACAAGACAGGTTTGAC CCGATCAAGCGCCGCCGCCTCGCCGCCCACCATGATCGCGAGGCTTCCGGCCTCGGCTCCGACCACGCCGCCGGAGACCGGCGCATCCAGCCAACCCATA
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MDWLGLHFITELPVNGQVILNCMHDPFLVLLAYLVACAGSFATLDMAERVAHAENLSSQRLWRWVGAGCLAGGIWAMHFIGMLAFQVPVDVHFQLPVTLL SLLIALLTSWLVMYTLSRPSLSFWQCLKASVWIGMGIATMHYVGMGAMQSQAKVYYQPVLFGLSILIAIGASLAALLLASHLRNGTGMFHQLFKYSASLV IGAGIISMHFTGMAAFNLLLPGGTVLPQPGEHNHLQLGVTVAVMTLLIIGSCISAALADKKLQKKDHDLQRVNSLLSQLDQARVSLQQVAHYDALTSLIN RRGFNQIFAEKLIEKTHEGGMLAVLFLDIDHFKRINDSLGHDAGDELLKVLASHIKASVRSHEDVVARFGGDEFCILIDLHDRDEARQMAQRIMLKMKDP IELAGRRMVMTTSIGISLFPEDGKTCEELLKNADLALYQSKGSGRNGLNFFSANLKARATLELQLEEELRHALREDTGLMLYYQPIYDLKTGQASKLEAL IRWQHPVHGFLAPDRFIALAESNGLITELDKWVLRKACQDLGELSRQGCDELKIAVNCSPLSLVREELAGEIEQALRSAAVAPRRLELEVTENALMGNIT ETLVLLQQIRALGVSLSIDDFGTGYSSLAYLKRLPLNTLKIDRSFIIDIPKSAQDMEIVQAIIVMAHTLHLDVVTEGVETFEQYQFLERHGCDFVQGYLL SRPVPLNDLRPVLDEINQRKHAYTVTPLSLVHGTTALM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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