Pseudomonas sp. 11/12A, GQ39_RS00785

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Coils	Coil	Coil	-	-	456	476	-
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	462	724	4.5E-96
Pfam	PF00563	EAL domain	IPR001633	EAL domain	467	703	3.0E-74
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	274	451	8.6E-55
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	295	452	5.3E-47
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	276	716	0.0
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	279	451	9.2E-60
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	291	446	3.77118E-61
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	202	251	1.5E-6
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	462	718	1.1E-89
SMART	SM00052	duf2_2	IPR001633	EAL domain	461	708	2.1E-107
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	73	127	4.8E-14
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	466	719	1.7E-86
CDD	cd01948	EAL	IPR001633	EAL domain	470	708	2.24899E-109
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	285	452	3.9E-44
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	286	449	7.4E-46
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	290	446	5.3E-47
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	134	186	2.2E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.