Pseudomonas sp. 10B238, RT21_RS03440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 10B238 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGAGGAAACATACTCGTTGGCGATTTGTACCGCAGAGGCGCTCAAGTGCGCCGGCGGCGAAACACAGTTTGGTGTGATAGGAACCGATATCAGTCTCA GCGCGTTAAGCCGTTCGCGCGAGGGCCTTTACGGTCTTCGTCGGCTCGAGCAGCTGGACCCCGACCTACGCGAGCGGTATTTCCAACCACTGGCGGGTGA TCGTTTCCAAGTAGTGCCTAGCCTGGCAGCAAGGGTGTGCTTTGCCCGACTTAACGTGCTGGAGCTGGCCAGTTCGCCAATGTCCGATGTGGACGTCATT TTTTGTCAGAACCTGTTGATTTACTTCCGTCGCTGGCGCCGCCGCGAAATCCTCAATCGTCTTGTCGAGCGCCTGGCGCCGGGAGGATTGCTGGTTATCG GTGCGGGCGAGGTTGTTGGTTGGCAGCACCCGGAGCTAGTTCCGGTGGCTGATAGTCAGGTTCTGGCCTTTACCCGGAAATGTTTATGAGCGGAGTCGCT
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| DNA Sequence for Gene |
>RT21_RS03440
ATGGGTGATCGGCACGATTATGTCGCCCTGGAGTGGGTGAAAGGCGAAATTGCCGAAACGCTGAAGCAGGCACGGCAGGCCTTGGAAGCGTTCGTCGAAA ACCCGCAAGACTCGACGCGGATGCGCTTCTGTCTGACCTACGTGCATCAGGTGCTCGGCACCTTGCAGATGGTTGAGTTTTATGGCGCTGCACTGCTTGC CGAGGAAATGGAGCAGCTTGCCCGTGCGCTGTTGGATGAAAGCGTCGCCAGCCAGACCGAAGCGCTTGAAGTGCTCATGCAGGCGATTCTGCAGATGCCG GTTTATCTGGATCGTATCCAAAGTGCTCGGCGCGATCTACCCATGGTCGTGCTGCCGCTGCTTAACGATCTTCGGGCGGCGCGTGGCGAGAAGCTGTTAT CGGAAACCAGCCTGTTTTCGCCAAACATGTCCGCGCGGGCGCCGGCCCTGTCGGGCGAGTTTTTGGCGCAGCGACAGACCGAGGATCTGCCAAGTTTGCT GCGAAAACTACGGCAGATGTTGCAGGTCGCGTTGGTAGGGGTCATTCGCAACCAGGATCTACCTACCAACCTAAGCTATATGGCGCGAGTCTTCGCGCGT CTGGAAATGCTCTGTAAGGATGCGCCGTTGGGCGCGCTGTGGCAGATCGCATCCGGCGTGGTTGAGGGGCTCGCCAGTGGCGCTGTCGTTAATGGCACCA CGGTTCGGAACCTGTTACGGCAGGTAGACAAAGAGCTGAAGCGTCTGGTCGCTCAGGGCGCAGAGGGCATCAACCAGGCCGCCCCTGACGAGCTGACCAA GAATCTGCTGTTCTATATCGCCAAGGCGCCGGCTCAGTCGCCCCGCATCCAGGCCTTGAAAGCTGAGTACAGTCTGGATGATGCGTTGCCTGACAGCACG CTAGTCGACGAAGAGCGGGCTCAGCTGGCCGGGCCGGACCGCGGTGCCATGCGCTCGGTTGTGGCCGCTTTGTGTGAGGAGCTGGTTCGGGTCAAGGACA GCCTGGACCTCTTTGTACGCAGCGACCGTCTGGGACTCACTGAGCTTGGCGCGCTGCAGCCGCCGCTCAAGCAGATTGCCGATACACTCGCCGTGCTCGG TTTCGGTCAACCACGTCGGATCATTCTAGAGCAGATCAGCCTGGTCGAAGCCTTGGCCAATGGGCAGCAGCAGCCTGACGACGCTGCTTTGATGGATGTC GCAGGCGCCCTGCTGTACGTCGAGGCGACGCTCGCTGGCATGGTTGGGGGCACCGCAGCCGAGCATCGAGGCGAGGAGAGTCACCTCCCAACCACGGACG TCGGCCAGATCCATCGCCTGGTTATCCGAGAGGCGCGTACAGGCCTGGAACAGGCGAAAGACGCGATTATCGAGTTCATAGCCTCCCAATGGAATCATCA ACATCTGGCGCGTGTTCCGGAGTTGCTTACCCAGTCCCGCGGCGGGCTCGCAATGGTACCCCTTGCCCGCGCTGCTGCCTTGCTGGATGCCTGTAACCGC TACATCCAGGAGCAATTGCTTGCGAAGCAGGCGATCCCGGATTGGCAGAGTCTGGATACGCTGGCTGATGCAATAACCAGCGTCGAGTACTACCTCGAGC GTCTCAGCGAAGATTGCGGCTCGCAGGGCGACCTGATTCTGGATGTCGCTGAAGAAAGTCTGCAGGCGTTGGGCTATCCGCTCAGTGAGCAGCCTTCTAG CGCGTTGGGAGAAGCCAGCCCTGAGGTGAGCGTCGAGCCGTCAGATCCGCTCGATGACATCGAAGTGCTGCCTTCCGAGCCCGCGGAGGCCCCCGAGCCG GCTGCCGAAATGCAAGACCAGGCCTCGATACGATCAGATTTACCGCCTTCTGAGCAGCACCCGAGTGTTGATACCGAGCTGGCCAACCAAGGAGCATTGG GCGTCGATGTTTTGGCGGAAACCGAGTCGTTCGATTGGCCAGGCGAAACTCTCGAACTGACCGAGTTGGAGCCTTTGCAGGCGGACGATGCGTCGCACGC TGCCGAAGGACAGCCTGCCGATGATTCGCCGGGCTACGAGCTGGAGTGGAGCGAAGCCGAGATGGCTGCGCTCGATATGCCTGAAGTCGTGCTGCCCGGC CCCATGGTTCATTCGGCTTCTGACGAGCCGGCTCTGACCATGGAGGACGTAATGGCTACGCCTGTCGTCTCGGTCAATCCCCCTGCTTGGGATGTTCCGC CGAGCCTTCTGCCTCCGCCTGAAGATGAGGAGGCAGTCGATGATGACTTGCTCGAAGTGTTCATCGAGGAAGCCGCTGAGGTTCTCGAAACCATCACCGA ATACCTGCCGCGTTGGTGTGAAGACCCCTCTGACAAGGAGGCGCTCGGCGAGGTGCGGCGCGCCTTCCATACACTCAAGGGCAGCGGGCGCATGGTCCGT GCGTTGATCATTGGCGAACTCGCCTGGTCTGTCGAAAACCTGCTCAATCGGGTCCTTGATCGCAGCATTGACGTAGGCGAGCCGGTCAAGCAACTGGTAC GTGACGTAGTGGCTCTGATGCCAACCCTGGTCGAAGAGTTTGCAGCGAAGGCACAACGCCAGCGCGACGATGTCGATCGGTTGGCTGCCAACGCTCACGC CTTGGCCAAAGGGGAGTCACCTGAACCTGACCCTCAGGGCGGAGTCGCGATTGACCAGCCGGCCCAGGAAGAGGTGATTGATGAAGTGCTGGATCCGCAG TTGCTGGAGATATTCCGCAACGAGGCAGAGGCGCATCTTGCAACGCTCGTCGACTTTCTCGCCGATTGCGCGCAACGTCTGCCGCAACCAGTTACCGACC CTTTACAGCGTGCGCTACATACCCTCAAGGGGAGCGCGCACATGGCCGGAATCCTTCCGATGGCAGAGATCGCCACACCATTGGAAAGAATGGTCAAGGA GTTCAAGGCCAACCTGATACAGATGGATCTGGCTGAGGCCGAACTGTTACATACCGCAGAGCAGCTGCTCAGGCGAGGGCTGGACAATCTTGAGCGTGAG CCACTGGCAACGATCGAGGGAGCAGAAGATTTCATAGCCAGCGTGCATGCGCTGCATCAGGCACGGCTGGCGGACGCTGGCGAGCGTGGTGATACAGAAC AGGGTGAGCCACGCGATCCAGGCATGATTGCGATGTTTCTCTCCGAGGGCATGAACATCCTGCTCGACGCCGAAGCGCTTTTGCAGAGCTGGCGCGAGCA TCCTGCCGAGCGGCAGGAGCTAACGGCGTTGTTGGAAGAGTTGACGACGCTTGGTCTCGGCGCTCAGATGGCCGAGCTTCCGCAAATCGACACGCTGTGT CAGGTGTTACTCGACCTGTATGCGGTTGTGCAGGAAGGTCGTCTCGCAGTCAGCGCACGGTTCTTCGATGACGTTGAACAGGCTCACGAGGCGCTGGTTG GCATGATGGATCAGGTGGCGGCCGGTCTGCAGGTGACCGGACAGCCGGAGCTGGTGGGCCGGCTTGAACAGTTGCTGGCCGAAGCGATTGATCCGCTCAC CTTTGAGCAGCCGGGCGAAGAAAGCGCCATGGCGCCGTCTGCTACGTTTGACTCAATGGACGGTGCTACACAGCCTCAAGCCGAAGCCGAAGCCGAAGCC GAAGCCGAAGCCGAAGCCTGGCTCGCCGAGCCTTCGTTGGGCCAGGACGAGCTAGACGAGGAAATGGTCGAGATCTTTCTTGACGAAGCGGTCGATCTGT TGGAGAGCGCTGGCGGTGCGCTGGAACGCTGGCTGGGAGACCCAGCCAATCAGTTGGCGTTATCGGCCTTGCTGCGTGACCTGCATACCCTCAAAGGCGG CGCGCGAATGGCTGAAATTCGGCCGATCGGTGATCTCGCGCATGAGCTGGAAACCCTCTATGAAGGGCTTTCAGACGGTCGCTACGTGCATACGGATGAT CTTGCCTCGCTGCTCCTACGCAGCCACGATCAGCTGGCTATTCAACTTGAGCAGCTCCAGGCGCACAAGCCAATGGACCCCGCTGCGCGGCTAATCGAGC ATATTCGCGCCTATCGGCATGGGATCGCACCGAGCTTCGACCCGGCTGTTTCGTCCGATGACGAAATGCAAATGGTCGACGAGGACCCGCAGAGGGCTGA GTCCGCTGCTGATGACTCAGAGCAACTGAAAGCTGCGCAGGGGCCCGATGATCCCATGCTCGAGCATGATGCGGACACCGATGAACCTGAGGTCGAACGT GCATCGGGCGACGCTCTCCCGTTTGAAGCGTTGGTCCAGCCAGTGGAGCAGGTTGTCGTAGAGCTGCCCGAAGAGCCGAAACCGGCCGAATCGAAGGAGC CGACTCCGGCGGCCGAGTCAGGCAAGGCAGGAGCAGGCAGCTGGGAAAACCGCGATCCAGAGCTGGTAGAGATATTTCTAGAGGAAGGCTTTGACATCAT CGAGCGCGCCGGAGCATCGCTTCAACGCTGGATCGATGATGTGGACAATAGTTTTGAGATCGAAGCGTTGCAGCGGGATCTGCACACCCTGAAAGGCGGT GCGCGGATGGCGGACATACGCGAGATCGGTGATCTGGCCCACGAATTGGAGTACCTCTACGAGGGGCTGTGCGCCGGTCATTACCGCGCCAGTCCAACCT TGTTCGCCCTCTTGCAAACATGCCATGACCGCCTCGCGGCGATGCTCGATGCCGTGCGCGCTTTCCGTGAGCTGCCGGACGGACAAGACCTGATCGCAAC CATTCAGCGTTTTCGGGCGAACCCTGAAGAGCAATTGAGCATGCCCAGCAGCGTTGCGTTGAAGGCAGCGCAGGATGCCGCCCAAGACGCTGCCGAAGCC GAGATTCTCGATATTTTCGTCGAAGAAGCGGACGAGCTGCTGGAGGAAATGGAGTCCGCTCTCGGGCGCTGGGAAGCCACAGGGGATGGCGTCGCGCCTC TGGCCGACATGATGCGGGTGCTCCATACCCTGAAAGGTGGTGCGCGGCTGGCGGCTCAAGTTCGTCTGGGCGACATGGCTCATGACCTGGAGCAACGTCT CAGCGATGCGCAACTGCAAGACGGTCCATGGACTGACAGCCTGTTTCTGGACGTGCAGGGCAGCTATGACGCATTGCTCAAAGAAGTCGAGTCGATGCGC TCGCGGCTGATAACTGAGCCCGATCTGGAGACAGACTCACAGCCGCAGGAAAATACGCAGGCGGAGCACACAAGCTCGTCCGTCATCGTGCTCGAAACGC CTATTGTGGCCGCCAGTGCTCAGGCTCCGATCAGCACCTCGCCGGCTAAGGTTCTGCCATTCATCCGCCGCGCCGAACAGGCTGCACTGGATGCTGCTTC ACGCCGCGCACCGCAGGAACTGGTCAAGGTGCCTGCGGACCTTTTGGAGGGATTGGTCAACCTGGCGGGCGAAACATCAATTTTCCGCGGTCGGGTTGAG CAGCAGGTCAGCGACGTTGGCTTCACCTTGGGAGAGATGGAAGCCACTATCGAGCGGGTTCGCGATCAGTTGCGACGGTTGGACACCGAAACCCAGGCGC AGATCCTTAGCCGCTATCAGGCTGAGGCCGAGCGTGCAGGCTACGACGACTTCGATCCGCTGGAAATGGACCGGCATTCGCAGTTGCAGCAGCTGTCACG CGCACTGTTCGAGTCGGCATCGGACCTGCTGGATCTAAAGGAAACCCTGGCCGCGCGTAATCGCGACGCGGAAACCTTGCTGCTGCAGCAGGCGCGGGTC AACACGGAGCTGCAGGAAGGCCTCATGCGCACCCGCATGGTTCCCTTCGATCGGCTGGTGCCTCGTTTGCGCCGGATCGTTCGTCAGGTGGCTGGCGAGC TAGGCAAGCAGGTCGAGTTCCAGGTGGGCAATGCGACAGGTGAGATGGACCGCAGCGTACTCGAGCGCATCGTTGCGCCATTGGAGCATATGCTGCGCAA CGCGGTTGACCACGGTATTGAGGTCGGCGCCAAGCGTGTCGCAGCAGGTAAGCCCGAGCAGGGCAACATTCGCCTGGACCTGAGCCGTGAAGGCGGGGAT ATCGTGCTGGCCTTGAGCGATGACGGTGCAGGCATCAACCTTGAAGCCGTTCGCCGCAAGGCGATCGAGCGCGGCTTGATGCAGCCCGGCATCGAACTGT CGGACCATGACGTGCTGCAGTTCATTCTCGAGGCCGGTTTCTCGACCGCCGAGCAAGTGACGCAGATATCCGGGCGTGGCGTCGGCATGGATGTGGTGCA TTCCGAGGTCAAGCAGCTCGGGGGCTCCATGAGTATCGAGTCTACGCTTGGCAAAGGAACACGCTTCCTGATCCGCCTGCCATTCACTGTGTCGGTCAAT CGGGCTCTGATGGTGTATTCCGGCGAGGATCTTTATGCGATTCCGCTGAACACGATCGAAGGTATCGTGCGTGTGTCGCCTTTCGAACTCGAAGCCTATT ACCAGCCAGGTGCATCGCGCTTCGAGTATGCGGGACAGACCTATGAGTTGCGCTACTTAGGCGAGCTGCTGAACAACGGTCAGCGGCCAAAGCTGGTCGG GCAAAGCCTGCCGTTGCCGGTAATCCTGGTGCGTTCGAATGACCACAGTGTGGCGGTACAGGTCGATAGCCTCGCCGGTTCCCGAGAAATTGTGGTGAAG GGCTTGGGGCCGCAATTTGCCACTGTGCCAGGTATTTCCGGTGCGACCATCCTCGGCGATGGCCGAGTTGTTGTGATCCTCGATCTGCTCGCGACAATCC GTGTTCTGCATGCGCATTTGCTCACCCAGCAGCAACCATTGCGCCTGCTCGGCGAAGACGAACCGGCCGATATTGAAGTTGATCGGCCAACGCTGGTGAT GGTCGTTGACGATTCGGTGACTGTGCGCAAGGTCACCAGCCGCCTCCTAGAGCGGAACGGAATGAACGTGCTGACGGCCAAGGATGGTGTCGACGCAATC ACGCAGCTGCAGGAGCGCAAGCCGGACATCATCCTGCTGGATATCGAGATGCCGCGGATGGACGGTTTCGAAGTAGCGACGCTGGTGCGACACGATGAGC ATCTGAAGGATCTGCCCATCATCATGATTACCTCGCGAACCGGCGAAAAGCACAGGGATAGGGCCATGGCCATCGGTGTGAACGAGTACCTTGGAAAGCC TTATCAGGAATCGCTGCTACTCGAGACAATCCAGAAATTGGTTCCGCGTCATGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGTCAGCCCCGCCCGTATCGGTGTGATCGCAGACACTTCGTTGCAGCGCCATGTGTTGCAGCAGGCCTTGAGTGCCAATGGTTACAACGTCGTGCTCAAC TGCGACCCGGCGCGGATTGAGGAATCAGACCTGGTGGCAGCGCAAGCCGACCTGTGGCTGGTTGATCTCGCGCAGACCGAGGATTCCCCTCTGGTCAATG CCTTGCTCGAGCGGGACAGCTGTCCGGTTTTGTTTGGCGAGGGGCACGCGCCGGAGCGCCACTCCGAACATTATCCGCGCTGGGAACGGCGCATGTTTGG CAAGCTGAAGCGGTTGGTTGGCGACCCTTCTCGAGTTGTGGGCCCACGTCTTGAGGTGTTGCGTGGGGAAGCGGAACGTGCCACCCGCCTGGCGTTGCCT GGCACGCTGCTGGCTGCGGCTGATTCGATCGCCGGGGAACCTGCCCGCGAAGTATGGCTACTGGCGGCATCGCTGGGCGGGCCAGAGGCGGTAAAGGCTT
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| Amino Acid Sequence |
>chemotaxis protein CheA
MGDRHDYVALEWVKGEIAETLKQARQALEAFVENPQDSTRMRFCLTYVHQVLGTLQMVEFYGAALLAEEMEQLARALLDESVASQTEALEVLMQAILQMP VYLDRIQSARRDLPMVVLPLLNDLRAARGEKLLSETSLFSPNMSARAPALSGEFLAQRQTEDLPSLLRKLRQMLQVALVGVIRNQDLPTNLSYMARVFAR LEMLCKDAPLGALWQIASGVVEGLASGAVVNGTTVRNLLRQVDKELKRLVAQGAEGINQAAPDELTKNLLFYIAKAPAQSPRIQALKAEYSLDDALPDST LVDEERAQLAGPDRGAMRSVVAALCEELVRVKDSLDLFVRSDRLGLTELGALQPPLKQIADTLAVLGFGQPRRIILEQISLVEALANGQQQPDDAALMDV AGALLYVEATLAGMVGGTAAEHRGEESHLPTTDVGQIHRLVIREARTGLEQAKDAIIEFIASQWNHQHLARVPELLTQSRGGLAMVPLARAAALLDACNR YIQEQLLAKQAIPDWQSLDTLADAITSVEYYLERLSEDCGSQGDLILDVAEESLQALGYPLSEQPSSALGEASPEVSVEPSDPLDDIEVLPSEPAEAPEP AAEMQDQASIRSDLPPSEQHPSVDTELANQGALGVDVLAETESFDWPGETLELTELEPLQADDASHAAEGQPADDSPGYELEWSEAEMAALDMPEVVLPG PMVHSASDEPALTMEDVMATPVVSVNPPAWDVPPSLLPPPEDEEAVDDDLLEVFIEEAAEVLETITEYLPRWCEDPSDKEALGEVRRAFHTLKGSGRMVR ALIIGELAWSVENLLNRVLDRSIDVGEPVKQLVRDVVALMPTLVEEFAAKAQRQRDDVDRLAANAHALAKGESPEPDPQGGVAIDQPAQEEVIDEVLDPQ LLEIFRNEAEAHLATLVDFLADCAQRLPQPVTDPLQRALHTLKGSAHMAGILPMAEIATPLERMVKEFKANLIQMDLAEAELLHTAEQLLRRGLDNLERE PLATIEGAEDFIASVHALHQARLADAGERGDTEQGEPRDPGMIAMFLSEGMNILLDAEALLQSWREHPAERQELTALLEELTTLGLGAQMAELPQIDTLC QVLLDLYAVVQEGRLAVSARFFDDVEQAHEALVGMMDQVAAGLQVTGQPELVGRLEQLLAEAIDPLTFEQPGEESAMAPSATFDSMDGATQPQAEAEAEA EAEAEAWLAEPSLGQDELDEEMVEIFLDEAVDLLESAGGALERWLGDPANQLALSALLRDLHTLKGGARMAEIRPIGDLAHELETLYEGLSDGRYVHTDD LASLLLRSHDQLAIQLEQLQAHKPMDPAARLIEHIRAYRHGIAPSFDPAVSSDDEMQMVDEDPQRAESAADDSEQLKAAQGPDDPMLEHDADTDEPEVER ASGDALPFEALVQPVEQVVVELPEEPKPAESKEPTPAAESGKAGAGSWENRDPELVEIFLEEGFDIIERAGASLQRWIDDVDNSFEIEALQRDLHTLKGG ARMADIREIGDLAHELEYLYEGLCAGHYRASPTLFALLQTCHDRLAAMLDAVRAFRELPDGQDLIATIQRFRANPEEQLSMPSSVALKAAQDAAQDAAEA EILDIFVEEADELLEEMESALGRWEATGDGVAPLADMMRVLHTLKGGARLAAQVRLGDMAHDLEQRLSDAQLQDGPWTDSLFLDVQGSYDALLKEVESMR SRLITEPDLETDSQPQENTQAEHTSSSVIVLETPIVAASAQAPISTSPAKVLPFIRRAEQAALDAASRRAPQELVKVPADLLEGLVNLAGETSIFRGRVE QQVSDVGFTLGEMEATIERVRDQLRRLDTETQAQILSRYQAEAERAGYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLAARNRDAETLLLQQARV NTELQEGLMRTRMVPFDRLVPRLRRIVRQVAGELGKQVEFQVGNATGEMDRSVLERIVAPLEHMLRNAVDHGIEVGAKRVAAGKPEQGNIRLDLSREGGD IVLALSDDGAGINLEAVRRKAIERGLMQPGIELSDHDVLQFILEAGFSTAEQVTQISGRGVGMDVVHSEVKQLGGSMSIESTLGKGTRFLIRLPFTVSVN RALMVYSGEDLYAIPLNTIEGIVRVSPFELEAYYQPGASRFEYAGQTYELRYLGELLNNGQRPKLVGQSLPLPVILVRSNDHSVAVQVDSLAGSREIVVK GLGPQFATVPGISGATILGDGRVVVILDLLATIRVLHAHLLTQQQPLRLLGEDEPADIEVDRPTLVMVVDDSVTVRKVTSRLLERNGMNVLTAKDGVDAI TQLQERKPDIILLDIEMPRMDGFEVATLVRHDEHLKDLPIIMITSRTGEKHRDRAMAIGVNEYLGKPYQESLLLETIQKLVPRHE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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