Pseudomonas simiae 2-36, LS88_RS28925
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 1670 | 1803 | 0.0064 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 611 | 647 | 7.5E-4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 864 | 897 | 0.0043 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 864 | 918 | 4.7 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 51 | 336 | 7.4E-104 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 596 | 665 | 240.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 486 | 508 | 0.98 |
| Pfam | PF05860 | TPS secretion domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 58 | 308 | 3.4E-60 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1109 | 1144 | 0.027 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 692 | 729 | 0.0019 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 1877 | 1940 | 5.6E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 443 | 480 | 1.2 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 1806 | 1872 | 4.8E-7 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 1953 | 2025 | 0.001 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 902 | 938 | 0.0071 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 55 | 332 | 3.45E-63 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 819 | 854 | 0.0013 |
| NCBIfam | TIGR01901 | JCVI: filamentous hemagglutinin family N-terminal domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 82 | 180 | 1.2E-18 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 547 | 579 | 4.9 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 507 | 538 | 5.9 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 781 | 814 | 0.65 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1283 | 1320 | 2.5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1753 | 1790 | 2.8 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 968 | 993 | 0.11 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1132 | 1195 | 55.0 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 382 | 447 | 0.0045 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1049 | 1086 | 1.8 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 466 | 506 | 0.25 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1023 | 1086 | 0.2 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1289 | 1328 | 28.0 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 547 | 595 | 7.5 |
| SMART | SM00912 | Haemagg_act_2a | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 64 | 185 | 1.4E-48 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 330 | 366 | 0.014 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1128 | 1164 | 0.16 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 466 | 501 | 0.011 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 397 | 436 | 4.1E-4 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.