Pseudomonas putida YKD221, TR32_RS18605

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCAGGCAGCGACAGGGGCACGCGGTGATTGCCCTGATCGACATCGATCACTTCAAGACCATCAACGACACCTTTGGCCATGTGGTCGGCGACTGTGTACT GCGCCAGCTCAGCGCTGAGCTGCGGCGCAGTTTGCGCGAGGGCGACCAGGCCGGGCGTTACGGCGGCGACGAATTCTGCGTGATCCTGCCCGAAATCAGC GAAGCCCAGGCCTGCCAAGTCATGGAGCGTCTGCGCGAGCGGGTTTCCAGCTACCGCAACACACAGTTACCGCACCTGCGCATCAGCCTGAGTATCGGCC TGTCACCCTTCGAGGCCAACCTCGAGTCCCCCGAGCACTGGCTCGAACAGGCGGACAAGGCGCTGTACATCGCCAAGCACGCTGGCCGCGATCAGGTCAA TTTTGCCCGCGGTGAAGCTGCCGCGCTCAGGCTGGCCTATCCTGATTGAACCTCCTTCCTGTCTGCCTGGCGGGAGGTTGCCTGAAGGAGCCGCTCGCGC
DNA Sequence for Gene
>TR32_RS18605
ATGGCCAGGACCGCCAAGCTTCTACCCGCTAGCCCCACACCGCGCTTTCAGGTGCGCCACCTCATTGCCGGTTTCAGCGCAGTGTTCGGCCTGGCTTGCC TGGTCATTCTCGGCGCTCTGTTCAATATCGCCAGCACACTCGACCAACAGGAGCGCCAGCGTAGCGCCTTCCATGCGAACCAGGCGCTGGAACAACGGCT GCTCGCCTCGCGCCAGTTTCTGTCCAGCTATGCCGTATGGGATGCAGCCTTCGAGCACTTGTCGGGCCAAGCCGACTGGCAATGGGCCTACGAGGAAAAA AACATAGGTGAGTCGCTGTACAGCGCCAGCGGCTACGAAGGGGTGTTCGTAGTGGAAAACGACCGCACCACCTATGCCTTGTTCAAAGGCCAGCCCAGCC AGGCAGGTGCCAACACCTACATAGACACACCGCTGCAGCCGATCATCGAACAAGCCCGCGCGGCGGCAGTTTCACGCGAGCAAATCACCCATTTCGTGCT GTTCAATGGCTGGCCGGCCGCACTCAGTGCAGCAGCCGTGCGCCCGGACCGGGAGGTTACCGACAGCGAGGTGAGCCAGGCGCCGGTGATGCTGTTCATT GACCAGCTCACCGAAAGCAAACTGGCGCAGTTGGGCAACGGCGCCGGCCTGACGGGCATGCACGTGGAAAAGGAGGATATGCAGGATCACAGCCACCTGC GCATCGACCTGGGCGACACCGGCTACCATCTGACCTGGAACAGCCCACTGCCGGGGCGTCAGATGCTGCGGGCAGTGTTGCCAGCACTGTTGTGCGCACT ACTGATACTTGGCTTGGTGATGCTGTACCTGTTCCGCCATGCCTTGCGCAGCTCCCGGGCAATCGGCCTCACGCTCGTGCATCTGCAACAAAGCAACCAG GCCCTGGAGGCCAGCGAGCAGCGTTTCCGCGCGGTGGCCGAATCGGCATCCGACTGGATCTGGGAAACCGACCGGCATCAACGCCTGACCTACCTGTCGC AACGCTTCGCCAACGTCACCGGCTACCCGGTAGACGGCTGGCTGGGCCACCCGCTCAACCAGTTGCTGGCCTGCGACACCACGCCGTTGTCACCTTGGCT CGACGCCCTGGCTACCGCCGACCCGCAGCAATTGGCCAACCTGCGTTGCACTTACCGCGACCAGAATGGCCAGAACCGCTACTGCCGGATATCCGCCCGC GCTATCTGGCGCGATGGCAAGGCCATCGGTTTTCGGGGTACCGCCAGCGATATCACCGACGAAGTCGACGCCCACGCGCGCATCCAGCATCTTTCGCTGC ACGACCCACTGACCGGGCTGGCCAACCGCAATAAGCTCGCCCGGCACTTGGAGCAAGCCTTGTTGCGCGGCAGTGACTCGCCGCCGCTGACCTTGTTGCT GCTGGACCTGGACAACTTCAAGCCGATCAACGACTCGCTCGGTCATGCCGCCGGAGATGCCGTGCTGCAAGAAGTGGCAACGCGCCTGCGTGACACCACC CGCGATGGCGACCTGGTCGCGCGTCTGGGCGGCGACGAGTTCATCCTGGTACTCAGCGGCATGGACAACAGCAGCGAGATCGACCGCTTCTGTGCGCGCC TGATCGGCCTGCTGCAGCAACCCATCGTCTTCGAAAGCCAGCCGCTGCACATCGGTGCCAGCATTGGCGTTGCCCAGACGCGTAACCAGGGCTTCGATGC AGGTGAGCTGATCCGCTGCGCCGACATCGCCCTGTACCAGGCCAAGGCCGATGGAAAGAACACATGGCGCTACTTCGTTGCCGAAATGAACCAGCAGATC CAGTACCGCCGCCAGCTGGAGAACGACCTGCGCCGGGCCCTGCGCAATGAGGAGTTCGAGTTGCATTACCAGCCACGCTACCGCCTCGACGACCTGCGTA TCGTCGCGGTCGAGGCCTTGGTGCGCTGGCGGCATCCACAGGAAGGGTTACTGGGGCCGGACACCTTCATTCCGTTGGCCGAGCAGAGCGACATCATTGT TGCGCTGGGCCGCTGGGTGCTTCGCGAAGCTTGCCGCACTGCCCATGACTGGCCAGCCGACGTGCTGGTTTCGGTCAACCTGTCGCCTGCGCAATTCTTG CGCAGCGATGTGGTAGCCGACGTGCGCGAAATTTTGCTCGACACGGCCTTCCCCGCCCAGCGGTTGGAACTGGAGATTACCGAGAACGTGATGCTCAACG ACATCGAGGGCGCGCTAGGCACCATGCTGTCGCTCAAGGAGCTAGGGGTGCGCCTGAACATGGATGATTTCGGCACCGGCTATTCGTCGTTGGGCTACCT GCGTACTTACCCGTTCGACAGCATCAAGATCGACAAACGCTTCATCAGCGGCCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCATCATC AACCTGGGTGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGGCGCTGGAAAACGATCGCTGCCATGAAGTGCAAG GCTATTACCTGAGCATGCCCCTGGACAGCGCCGGATTGGCGGCGTTGTTGCACCAAACCTCCCAAAGCACTGCACAGCCCTTGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGCGGCCTTGCTCCTAAACAGACTGAGTGTGCTGCTGCAGGCTGCGCTGCGCCACGATTTCGGGCAGATCACAGCGGCGCAGGTAGGCGCGCAGCGGTT CACCAATGTTCAAGCGGTCATCCACATGCTGATCCAGCAACAGCGACAGCCGTTCGCGGCACAACACCATGCGCAGCCCTTGCTCGGGCCGCCAGACAAA CTCGCTGCAGGGGGTGATACTGGCGTCGGCCACGTCCATGCCGAACGCGTCCTCGGAGAAACGCACGATATGAACACCGCGCTTGCCGTGAAAACCGACA AAGCCCTTTAGCTGATCGGCGGCGTTGCAGATATCCTGGGAAGTGATGGCCATGACGTAACCTCGCAATGAAATCGGAAGATACGCACGCCTGGCGGAAG AAGGGTTGCCTCTGTCGGGCAACTCACAGCGGCAGCCTAACGCAACTGGCGGGCCGTTCGCCAAGTTTTTTCGTGCCTGCCCGACGTCGTCGACGACCTC
Amino Acid Sequence
>histidine kinase
MARTAKLLPASPTPRFQVRHLIAGFSAVFGLACLVILGALFNIASTLDQQERQRSAFHANQALEQRLLASRQFLSSYAVWDAAFEHLSGQADWQWAYEEK NIGESLYSASGYEGVFVVENDRTTYALFKGQPSQAGANTYIDTPLQPIIEQARAAAVSREQITHFVLFNGWPAALSAAAVRPDREVTDSEVSQAPVMLFI DQLTESKLAQLGNGAGLTGMHVEKEDMQDHSHLRIDLGDTGYHLTWNSPLPGRQMLRAVLPALLCALLILGLVMLYLFRHALRSSRAIGLTLVHLQQSNQ ALEASEQRFRAVAESASDWIWETDRHQRLTYLSQRFANVTGYPVDGWLGHPLNQLLACDTTPLSPWLDALATADPQQLANLRCTYRDQNGQNRYCRISAR AIWRDGKAIGFRGTASDITDEVDAHARIQHLSLHDPLTGLANRNKLARHLEQALLRGSDSPPLTLLLLDLDNFKPINDSLGHAAGDAVLQEVATRLRDTT RDGDLVARLGGDEFILVLSGMDNSSEIDRFCARLIGLLQQPIVFESQPLHIGASIGVAQTRNQGFDAGELIRCADIALYQAKADGKNTWRYFVAEMNQQI QYRRQLENDLRRALRNEEFELHYQPRYRLDDLRIVAVEALVRWRHPQEGLLGPDTFIPLAEQSDIIVALGRWVLREACRTAHDWPADVLVSVNLSPAQFL RSDVVADVREILLDTAFPAQRLELEITENVMLNDIEGALGTMLSLKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFISGLNNNGGSDRAVVQAII NLGEAMGLTVTAEGVESEHQLKALENDRCHEVQGYYLSMPLDSAGLAALLHQTSQSTAQPL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site