Pseudomonas plecoglossicida NyZ12, RK21_RS28160 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details]
DNA Sequence Upstream of Gene
GCGACTACGCCATCCAGGCGATCAAGGAAATCCTCGAGACCGAGATCCCGGTATTCGGTATCTGCCTGGGCCACCAGCTGCTGGCCCTGGCTTCTGGCGC CAAGACCGTGAAAATGGGCCATGGCCACCACGGTGCCAACCATCCGGTCCAGGATCTGGACACCGGTGTGGTCATGATCACCAGCCAGAACCACGGCTTT GCCGTTGACGAGGCCACCCTGCCGGGTAACGTCCGCGCCATCCACAAGTCGCTGTTCGACGGCACCCTGCAGGGTATCGAGCGCACCGACAAGAGCGCGT TCAGCTTCCAGGGCCACCCTGAAGCGAGCCCAGGCCCGACCGACGTCGCGCCACTGTTCGATCGTTTCATCGATGCCATGGCCAAGCGCCGCTGAGCATC CTGCTTCAAGGCCCCGGGCCGGCTTGCGCCGCGCCCGGAAGCGCCTGACCCAGATTGTTCAAAGCGGCTTGCCGACTGACCCCGGATTTGAGTGACAACC
DNA Sequence for Gene
>RK21_RS28160 |carB
ATGCCAAAACGTACAGACATCAAAAGCATCCTGATTCTTGGCGCTGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCCT GTAAAGCCCTGCGCGAGGAAGGTTTCCGCGTCATCCTGGTGAACTCCAACCCAGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA GCCGATCAAGTGGCAGTCGGTGGCCAAGATCATCGAGAAAGAGCGCCCGGACGCACTGTTGCCGACCATGGGTGGCCAGACTGCACTGAACTGCGCCCTG GACCTGGAGCGCCACGGCGTTCTGGAAAAGTTCGGCGTGGAAATGATCGGTGCCAATGCCGACACCATCGACAAGGCCGAAGACCGCTCGCGCTTCGACA AGGCCATGAAGGACATCGGCCTGGAGTGCCCGCGCTCCGGTATCGCCCACAGCATGGAAGAAGCCAACGCCGTCCTCGAGCGCCTGGGCTTCCCGTGCAT CATCCGTCCGTCGTTCACCATGGGCGGCACCGGTGGTGGTATCGCCTACAACCGTGAAGAATTCGAAGAAATCTGCGCCCGTGGCCTGGACCTGTCGCCG ACCAAGGAACTGCTGATCGACGAATCGCTGATCGGCTGGAAGGAATACGAGATGGAGGTTGTCCGCGACAAGAAGGACAACTGCATCATCGTCTGCTCGA TCGAGAACTTCGATCCGATGGGCGTGCACACCGGTGACTCGATCACTGTCGCCCCGGCACAGACCCTGACCGACAAGGAATACCAGATCATGCGCAACGC CTCCCTGGCGGTGCTGCGTGAAATCGGTGTTGAAACCGGCGGCTCCAACGTTCAGTTCGGTATCTGCCCGAACACAGGCCGCATGGTCGTGATCGAGATG AACCCGCGCGTTTCGCGTTCCTCGGCGCTGGCCTCCAAGGCCACTGGCTTCCCGATCGCCAAGATCGCTGCCAAGCTGGCTGTCGGTTACACCCTCGACG AACTGCAGAACGACATCACCGGCGGCCGCACCCCGGCCTCCTTCGAGCCGTCGATCGACTACGTCGTCACCAAGCTGCCGCGCTTCGCCTTCGAGAAATT CCCGAAAGCCGACGCCCGCCTGACCACCCAGATGAAGTCCGTGGGTGAAGTCATGGCCATCGGCCGTACCTTCCAGGAGTCTCTGCAGAAAGCTCTGCGC GGCCTGGAAGTCGGCGCCTGCGGCCTCGACCCGAAAGTCGACCTGGCCAACCCTGAAGCCAGCAGCATCCTCAAGCGCGAGCTGACCGTACCGGGCGCCG AGCGTATCTGGTACGTGGCTGACGCCATGCGTGCCGGCATGACCTGCGAGCAGATCTTCGACCTGACCGGCATCGACATGTGGTTCCTGGTGCAGATGGA AGACCTGATCAAGGAAGAAGAGAAGGTCAAGACCCTGGCCCTGTCGTCGATCGACAAGGACTACATGCTGCGCCTCAAGCGCAAGGGCTTCTCTGACCAG CGCCTGGCCAAGCTGTTGGGTATCACCGACAAGAACCTGCGCCGTCACCGCCACAAGCTGGAAGTGTTCCCGGTGTACAAGCGCGTCGACACCTGCGCTG CCGAATTCGCTACCGACACCGCCTACCTGTACTCCACCTATGAGGAAGAGTGCGAGGCCAACCCGTCGACCCGCGACAAGATCATGATCCTGGGTGGCGG CCCTAACCGTATCGGCCAGGGTATCGAGTTCGACTACTGCTGCGTACACGCCGCACTGGCGCTGCGTGAAGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACCGACTACGACACTTCCGACCGCCTGTACTTCGAGCCGCTGACCCTGGAAGACGTGCTGGAAGTGTGCCGCGTCGAGAAGC CGAAAGGCGTGATTGTCCACTACGGTGGCCAGACCCCGCTGAAACTGGCCCGCGCCCTGGAAGAAGCTGGCGTACCGATCATCGGTACCAGCCCGGATGC CATCGACCGCGCTGAAGACCGCGAGCGCTTCCAGCAGATGGTTCAGCGCCTGAGCCTGCTGCAGCCGCCAAACGCCACCGTGCGCAGCGAAGAAGAAGCC ATCAGCGCTGCTGGCGGCATCGGCTATCCGCTGGTAGTGCGCCCGTCCTACGTACTGGGCGGCCGTGCCATGGAAATCGTCTACGAGCTGGACGAGCTCA AGCGCTACCTGCGCGAAGCTGTGCAGGTGTCCAACGACAGCCCGGTACTGCTCGACCACTTCCTCAACTGCGCCATCGAGATGGACGTGGATGCGGTGTG CGACGGCACCGATGTGGTGATCGGCGCCATCATGCAGCACATCGAGCAGGCCGGCGTTCACTCCGGCGACTCGGCATGCTCCCTGCCACCGTACTCGCTG AGCAAGGAAGTGCAGGACGAAGTCCGCGTACAGGTCAAGAAAATGGCCCTGGAGCTGGGCGTGGTCGGCCTGATGAACGTGCAACTGGCCCTGCAGGGCG ACAAGATCTACGTGATTGAAGTCAACCCGCGCGCCTCGCGTACCGTGCCGTTCGTCTCCAAGTGCATCGGCACCTCCCTGGCGATGATCGCGGCCCGCGT CATGGCCGGCAAAACCCTGAAAGAGCTGGGCTTCACCCAGGAAATCATCCCGAACTTCTACAGCGTCAAGGAAGCCGTCTTCCCGTTCGCCAAGTTCCCG GGGGTTGACCCGATCCTCGGCCCTGAGATGAAATCGACCGGTGAAGTCATGGGTGTCGGTGACAGCTTCGGTGAAGCCTTCGCCAAGGCCCAGATGGGTG CCAGCGAAGTACTGCCGACCGGCGGTACCGCATTCATCAGCGTGCGTGACGACGACAAGCCGCAAGTGGCTGGCGTTGCCCGCGACCTGATCGCCCTGGG CTTCGAAGTGGTTGCAACTGCCGGCACTGCCAAGGTTATCGAAGCGGCTGGCCTGAAAGTGCGCCGTGTGAACAAGGTGACCGAAGGTCGCCCGCACGTG GTCGACATGATCAAGAACGACGAAGTGTCGCTGATCATCAACACCACCGAAGGCCGCCAGTCGATCGCCGATTCCTACTCGATTCGTCGCAATGCGCTGC AGCACAAGATTTACTGCACCACTACCATTGCGGCCGGTGAAGCCATCTGCGAGGCGCTGAAATTCGGTCCGGAAAAGACCGTTCGTCGTCTGCAGGATCT GCATGCAGGACTGAAAGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATTACCAAGTACCCGATGACCGTCCAGGGCGCTCGCGCCCTGGAAGAGGAGCACCTGTTCCTGAGCAAGACCGAGCGCCCGCGCCTGAGCCAGGCCAT CGGCGAAGCACGTGAACTGGGCGACCTCAAGGAAAACGCCGAATACCATGCCGCCCGTGAAGAGCAGGGCATGGTCGAGGCACGTATCCGCGATATCGAA GGCCGCCTGCAGAACTCGGTGGTGATCGACGTGACTACCATCCCTCACACCGGCAAGGTGATTTTCGGTACCACCGTGGTACTGGCCAACACCGAAACCG ATGAAGAGGTGTCCTACCAGATCGTCGGCGAGGATGAAGCCGACGTTAAACAGGGCAAGCTCTCGAGCGGAGCGCCGATTGCCCGTGCCATCATCGGCAA GGAAGAAGGTGATACTGTCGTCGTCAAGACGCCTAGCGGCACGGTCGAGTACGAGATTGTCGAAGTCAAGCACATCTGACCGGCGCCTGCGGGCGCCATC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMADATYIEPIKWQSVAKIIEKERPDALLPTMGGQTALNCAL DLERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLERLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKLPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGACGLDPKVDLANPEASSILKRELTVPGAERIWYVADAMRAGMTCEQIFDLTGIDMWFLVQMEDLIKEEEKVKTLALSSIDKDYMLRLKRKGFSDQ RLAKLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFATDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLARALEEAGVPIIGTSPDAIDRAEDRERFQQMVQRLSLLQPPNATVRSEEEA ISAAGGIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL SKEVQDEVRVQVKKMALELGVVGLMNVQLALQGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVSLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site