Pseudomonas plecoglossicida NyZ12, RK21_RS07570

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGGTGCTGGGCATTCTCTACGAAAGCTACATTCACCCGCTGACCATCCTCTCGACACTGCCCTCGGCCGGCGTCGGTGCCTTGCTGGCGCTGTACGTCA CCGGCGGCGAGTTCAGCCTGATCTCGCTGCTGGGGCTGTTCCTGCTGATCGGCGTGGTGAAGAAGAACGCCATCCTGATGATCGACCTGGCCTTGCAGCT GGAGCGCCACCAGGGCCTGACACCGGAAGAGTCGATCCGCCGGGCTTGCCTGCTGCGCCTGCGGCCGATCCTGATGACTACCCTGGCGGCCATCCTCGGT GCCTTGCCGCTGCTGCTGAGCCGCGCCGAAGGCGCGGAAATGCGCCAGCCTCTGGGCCTGACCATCATTGGCGGCCTGGTGTTCAGCCAGGTCCTCACTC TTTACACGACACCGGTGGTCTACCTGTACCTGGACCGCCTGCGTCACCGTTTCAACCGTTGGCGTGGCGTGCGCACCGACGCCGCCCTGGAAACCCCGCT
DNA Sequence for Gene
>RK21_RS07570
ATGACTTTTGCCCAGACCCCACTTCACCGTGCCCTGCAGACGCTGACCCGTGGGCGTGGCTCGCGCCTGCTCGGCGCCGGGTTGTGCGTCGCCTTGCTCA GCGCCTGCACCCTGAGCCCGGACTACCACCGCCCGGAGCTGAGCAGCACGGCGCAGTTCAAGCACGCCGAAGGCTGGACCCAGGCCACGCCGTCCGATGC CATCGCCCGCGGCGCCTGGTGGGAAATCTACGGCGATGCCGGGCTCAATGCACTGGTCGAAGAGCTCAACCGCAGCAACCAGACCGTGGCCCAATCGGAG GCCCAGTATCGCCAGGCCCAGGCGCTGGTGCGCAGCAGCCGGGCGGCGCTGTTCCCCAGCCTGGACCTGAGCGTCGGCAAGAACCGCTCGGCCCAGGGCA CCGGTAGCTCCAGCTCGAGCCTGTCCAACAACAGCAGCGGCATTCGCAACACCTACAACGCCCAGCTCGGCGTCAGCTGGGAAATCGACCTGTGGGGCAA GCTGCGCGAGACCCTGAACGCCAACGAAGCCAGTGCCGAAGCCAGCCTGGCCGACCTGGCCTCGATCCGCCTCAGCCAGCAGTCGGAACTGGTGCAGAAC TACCTGCAGTTGCGGGTGATCGACGAGCAGAAACGCCTGTTGGAAGCCACCGTGGCAGCTTATGAACGTTCCCTGCGGATGAACGAAAACCAGTATCGCG CCGGCGTCGCCGGCCCGGATGCAGTGGCCCAGGCGCGTACCCAGCTCAAGAGCACCCAGGCCGACCTGATCGACCTGATCTGGCAGCGCGCGCAGTTCGA GAACGCCATTGCCGTGTTGCTGGGCAAGGCCCCGGCGGACTTCGCCCTGGCCGACAGCAAATCCATTCCAGCGCTGCCGCAAATTCCGGTGGCCTTGCCT TCGCAGTTGCTGGAGCGACGCCCGGACATCGCTGCGGCCGAGCGCAACGTGATGGCTGCCAACGCCAACATCGGCGTGTCGCGGGCGGCGTATTTCCCGG ACCTGAGCCTGAGCATGAGTGGCGGTTACTCCAGCAGCAGCTTCAGCAACTGGATCGAACTGCCCAACCGCTACTGGTCGGTGGGCCCACAGCTGGCGCT GACCTTGTTCGACGCCGGCAAGCGCAGTGCCGAGGTGGACCGCACGGTGGCGGTGTATGACCAGACCGTGGCGCAGTACCGCCAGACCGTGCTCGACGGC TTCAAGGAAGTGGAAAACCTGCTGGTGCAGTTGAAGGTGTATGGCGATGAGGCGGTGGTGCGCCAGGAGGCACTGGATGCCGCTCGCGAGTCGCTGCGCC TGACCGAGAACCAGTACCGCGCCGGGCTGATCGGCTATCTGGATGTGGTCAACGTGCAGACCACGGCGCTGAGCAACGAGCGCAGTGTGTTGAACCTGCT GCAAGGGCGCCTGGTGGCCAGTGTGCAGCTGGTTGCCGCGCTGGGTGGTGGTTGGGATGCGGAACAGGCGTTTGCCGAGCAGGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATATTGGCAGTGCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCTCGGCACAATGGCTGATATTGCTGGGGCTGCTTC GCAGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAGAGAGTGCATTTCTGCGAGGCCGTACAGCGTCTTCCCTTTGGATCCATTCCCATTCGCAAAAAC CCCGTGCGTTTCGCCTGACCTTGAGTACAATCGTCAGCTTTTTCCGGGCCTCCCGCCCCGCTGGAACTCTCGATGCTGACCGGTAGCTACTCCTCTTCGC TGGTGTTGATTTCGCTGTGCGTGGCGATCCTGGCGTCCTATACCGCCCTTGACCTGACCGGCCGCATCGCCACGGCCAAAGGCCGGGCTGCCTGGCTGTG GATGGGGGGTGGCGCGCTGGCGATGGGCATCGGCGTATGGTCGATGCATTTCATCGGCATGCTCGCCTTCAGCCTGCCCATCGACCTGGGCTACGACCTT
Amino Acid Sequence
>RND transporter
MTFAQTPLHRALQTLTRGRGSRLLGAGLCVALLSACTLSPDYHRPELSSTAQFKHAEGWTQATPSDAIARGAWWEIYGDAGLNALVEELNRSNQTVAQSE AQYRQAQALVRSSRAALFPSLDLSVGKNRSAQGTGSSSSSLSNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASLADLASIRLSQQSELVQN YLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIWQRAQFENAIAVLLGKAPADFALADSKSIPALPQIPVALP SQLLERRPDIAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKRSAEVDRTVAVYDQTVAQYRQTVLDG FKEVENLLVQLKVYGDEAVVRQEALDAARESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWDAEQAFAEQD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site