Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00073066, PPL01S_RS02115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 strain NBRC 103162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCCTGGTGGCGGCGGCCAGGTCCGATGGCCATATCGATGAGCGTGAACGCGAACTGATCGAAGGCGAGTTCACCCGCCTGGACAGCGACGGCGAGCTG CAGCAGTGGCTGCATGCCGAACTTCACAAACCGTTGGATCCGGCCGAAGTCGCCCGCGCGGCACAGACACCGGAAATGGCCGCCGAGATGTACCTGGCCA GCGTGATGATGGTCGATCAGGAGAACTTCATGGAGCGCGCCTATCTTGATGAGCTTGCCCGCCAGCTGCGCCTTGACCCGGCGCTGCGACAGGAACTGGA GAACCAGGTCAGGCTTGCAGCCGGCCACTGACCGGAAACTGAGGGCTGCTTTGCAGCCCTTCGCCGGCAAGCCGGCTCCCATACGTGCCGTGGATCAGCA AAGTACTGCATTCTCCACGCATTTCAGCCGCAAAAGCGGAGGAAGCCTAGGCTATACTTCGACGATTTTCCCGCTCGTAGTGTATTCCTGAGGGCTGAAT
DNA Sequence for Gene
>PPL01S_RS02115
GTGAAGAACTGGACCTTGCGCCAACGGATCCTGGCAAGTTTCGCCGTGATCATCGCCATCATGCTGCTGATGATCGTGGCCGCCTACTCTCGACTTGTGA CGATCGAAAGTGCCGAGGAGGCTGTGGGGTCCGACAGCATTCCAGGGGTCTACTACAGCTCGATGATCCGCAGCGCCTGGGTCGACAGCTATGTCACCAG CCAGCAGCTGGTGGGGCTTTCCAACCGCCGTGAAGTCACCCCGGCCGACATGGAGCTGTTCAAGAGCTTCGACGAACGCCTCAAGCAACACATGGCCAGC TACCACGCCACCATCCAGGATCGTGACGACCAGGCCAGGTTCGACACCTTCGTGCGCATGGAGGAGACCTACGTCAAGCTGGTCGACCAGGTGCTGGAAG CCTATCGCCAGCGCCACTATGACGAGGCCGAGCGGCTGATCAGCGATGAGCTGACCCCGGCCTGGGTCGACGGGCGCAAGCACCTGAACACGGTGATCGA ACACAACCGCGAATCGGCCGAGGCCGCCACCGGCGAAATCGTCAGCGCGGTGAGCACCGCCAAAGGCAGCATGATGGTCTCGCTGCTGCTGGCGATCATC GCCGCCGGTATCTGCGGTCTGCTGCTGATGCGTGCGATCACCGCACCCGTGCAGCGTGTGGTCCATGCCCTCGACAAGTTGCGTTCGGGCGACCTGAGCA TGCGCCTGAGCCTCGACCGCAAGGACGAGTTCGGTGCCATCGAGAATGGCTTCAACGAAATGGCCGAAGCACTGGCCAACCTGGTGTCCCAGGCGCAGCG CTCCTCGGTGCAGGTGACCACCTCGGTGACCGAGATTGCCGCCACCTCCAAGCAGCAGCAAGCCACGGCTACGGAAACGGCTGCCACCACCACGGAAATC GGCGCTACCTCACGCGAGATCGCCGCCACCTCGCGCGACCTGGTGCGCACCATGACCGAAGTCACCAGCGCCGCCGACCAGGCGTCGAGCCTGGCCGGCT CTGGCCAGCAAGGCCTGGCGCGGATGGAGGAAACCATGCACCAGGTCATGGGCGCTGCCGATCTGGTCAATGCCAAGCTGGCGATCCTCAATGAAAAGGC CAGCAACATCACCCAGATGGTGGTGACCATCGTCAAGGTCGCCGACCAGACCAACCTGCTGTCGCTCAACGCCGCCATCGAAGCCGAAAAAGCGGGTGAA TACGGGCGTGGTTTTTCGGTGGTCGCCACCGAAGTGCGTCGCCTGGCCGACCAGACGGCCGTGGCCACCTACGATATCGAACAGATGGTGCGGGAAATCC AGTCGGCGGTGTCTGCCGGGGTCATGGGCATGGACAAGTTTTCCGAAGAAGTGCGTCGTGGCATGTACGAAGTCCAGCAGGTAGGCGAGCAACTGAGCCA GATCATCCACCAGGTCCAGGCCCTGGCACCGCGGGTGCTGATGGTCAACGAAGGCATGCAGGCCCAGGCCACCGGTGCCGAGCAGATCAACCAGGCCTTG GCCCAGCTCAGCGATGCCAGCACCCAGACGGTGGAGTCGCTGCGTCAGGCCAGCTTCGCCATCGATGAGCTGAGCCAGGTGGCCGCAGGCCTGCGCGGCG GCGTATCGCGCTTCAAAGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCATCATGACCGACCTGCACCCGCATCCGGCAGCGGCTGCCCAGGCCAAGGGCAAGGGCACGCTGTACCTGCAGTTTCGCATCGACCAGCAGCGCTTCGC CCTGGATGTGCACGAGGTGGTCGAGGTCCTGCCGCGCCGGCCGCTCAAGCCGATCGCCCAGGCACCGGCCTGGGTCGCTGGCATCTACGCCCACCGTGGC GTGCTGGTGCCGGTGATCGATCTGTGCGCCCTGAGCTTCGCCAAGCCCGCCGCCGCGCGCACCAGCACGCGCATGGTGCTGGTGCATTACCGCAAGGTGC ATCAGCTGGGCCTGATCCTGGAACAGGCGACCGATACTCTGCGATGCCGCCCGGAAGAGTTTCAGCCATACGGGCTGGACAATGACCATGCGCCTTATCT GGGCCCGGTACGCCAGGATGCCCAAGGGCTGTTGCAGCGCATTGCAGTGGATGATCTGCTCAGTGATGCGGTACACCAACTGTTGTTCCCGGATGTCCCA
Amino Acid Sequence
>methyl-accepting chemotaxis sensory transducer
MKNWTLRQRILASFAVIIAIMLLMIVAAYSRLVTIESAEEAVGSDSIPGVYYSSMIRSAWVDSYVTSQQLVGLSNRREVTPADMELFKSFDERLKQHMAS YHATIQDRDDQARFDTFVRMEETYVKLVDQVLEAYRQRHYDEAERLISDELTPAWVDGRKHLNTVIEHNRESAEAATGEIVSAVSTAKGSMMVSLLLAII AAGICGLLLMRAITAPVQRVVHALDKLRSGDLSMRLSLDRKDEFGAIENGFNEMAEALANLVSQAQRSSVQVTTSVTEIAATSKQQQATATETAATTTEI GATSREIAATSRDLVRTMTEVTSAADQASSLAGSGQQGLARMEETMHQVMGAADLVNAKLAILNEKASNITQMVVTIVKVADQTNLLSLNAAIEAEKAGE YGRGFSVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMYEVQQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINQAL AQLSDASTQTVESLRQASFAIDELSQVAAGLRGGVSRFKV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site