Pseudomonas parafulva CRS01-1, NJ69_RS12255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva strain CRS01-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGGTCTGATGCAGCCGTGGCGTTTCATCCGCATCAGCCAGCCCACGCTGCGCGCGCGCATCCAGGCACTGGTGGAGCAGGAGCGAGTGCTCACCGCAG AGGCGCTCGGCGAGCGCTCCGACGACTTCATGAAACTTAAGGTCGAGGGCATCGGTGAGTGCGCTGAAGTGCTGGTCGCGGCCTTGATGGATCAGCGTGA GCCGCACATCTTTGGCCGTCGCACGCTGCCGGAAATGGACTTGGCTTCGATCGCCTGCGCCATCCAGAACCTGTGGCTGGCCGCCCGCGCCGAGGGGCTG GGCATGGGCTGGGTGTCGCTGTTCGACCCGCAGGCGCTGGCCGAACTGCTGGGCATGCCGGCCGGTGCCCAGCCGGTGGCCGTGCTGTGCCTGGGCCCGG TGGCGCAGTTCTACGAGGCGCCGATGCTGGTGCTGGAGGACTGGGCCCGCGAACGCCCGCTGAGTGAGATGCTCTACGAGAACCAGTGGGGGACCCCGGC
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| DNA Sequence for Gene |
>NJ69_RS12255
ATGAGCATCGCCTTGCTGACCGTGGCGGGCGTCGCGCTGGACGCGCTGCTGGGCGAGCCGCAGCGACGCCATCCATTGGTGGCCTTCGGCAACTTCGCCG CCCGTTTGGAGCAGCGCCTGAACGCCGGCGGACGGGGTTGGCGCAGCCACGGCGTCAGCGCCTGGTTCCTGGCGGTGGTGCCGCTGACCCTGCTGGCGCT GATCCTGTCCTGGCTGCCGGTCATCGGCTGGCTGGTGGAAGCCTTGGCATTGTACTGCGCGCTGGGCATGCGCAGCCTGGGCGAGCACGTGCTGCCAGTG GCCCAGGCCCTGCGCCAGGGTGACCTGGACGAAGCGCGGCGGCGCGTGGGCTACCTGGTCAGCCGGGAAACCTCCGAGCTGGATGCTCCCGCCGTGGCCC GCGCCGCCACCGAATCGGTGCTGGAAAATGGCAGTGATGCGGTGTTCGCCGCGCTGTTCTGGTTCGTCGTGGCCGGTGCGCCCGGTGTGGTGCTGTATCG CCTGAGCAATACCCTGGATGCCATGTGGGGCTACCGCACGGCGCGCTTCGAGCGCTTCGGCTGGGCGGCGGCGCGCATCGACGATGCCCTGAACTATGTG CCCGCTCGTTTGGTGGCACTGACCTACGCGCTGCTCGGCAAGACCCGTCTGGCGCTGCGCTGCTGGCGCAACCAGGCGCCGCACTGGGACAGCCCCAATG CCGGCCCGGTGATGGCCGCCGGCGCCGGCGCCCTGGGTGTCGAGTTGGGTGGCCCGGCGGTGTATCACGGCGAGCTGCACGACCGTGCGCGGCTGGGTGA AGGGCTGGCGGCCGACGCCGACGCCATCGAGCGTGGCTGGAGCTTGGTGCAGCGCGGTGTCTGGCTGTGGTTGCTGGTGATCTGCCTGGGAGCCTGGCTG TATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACACGGTGGACGTTTGTTGCGCGCGGTACGCGAATACGGCATCGCGCGTCAGGACTGGCTCGACCTGTCCAGCGGCATCGCGCCGTGGTCATTCCCCATT CCTGAAGTCCCGGCGCAGGCCTGGGCGCGGCTGCCCGAAGTCGAGGACGGCTTGGAGCAGGCGGCGCGCAGCTACTACGGCGTGGCGCAACTGCTTGCCG TGGCCGGTTCGCAGGCAGCGATTCAGGCGCTGCCGCCACTGCGCCCGCGAGGTCGGGTCGGCGTGCTCTGGCCCTGTTACGCCGAGCATCCACAGGCTTG GCGCCAGGCCGGACATCGCCTGCTGGAGTTCGACGAAACCCAGGTCGAGGACGCCCTGGACAGCCTCGATGTGCTGGTGCTGGTCAACCCCAACAACCCC ACCGGACGCTGCGTGTCGCGCGAACAGTTGCTCGACTGGCATGCGCGTCTGGCCCGGCGCGGCGGTTGGCTGGTGGTGGACGAAGCGTTCATGGACAACA
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| Amino Acid Sequence |
>cobalamin biosynthesis protein CobD
MSIALLTVAGVALDALLGEPQRRHPLVAFGNFAARLEQRLNAGGRGWRSHGVSAWFLAVVPLTLLALILSWLPVIGWLVEALALYCALGMRSLGEHVLPV AQALRQGDLDEARRRVGYLVSRETSELDAPAVARAATESVLENGSDAVFAALFWFVVAGAPGVVLYRLSNTLDAMWGYRTARFERFGWAAARIDDALNYV PARLVALTYALLGKTRLALRCWRNQAPHWDSPNAGPVMAAGAGALGVELGGPAVYHGELHDRARLGEGLAADADAIERGWSLVQRGVWLWLLVICLGAWL YA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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