Pseudomonas oryzihabitans RIT370, UM91_RS09270

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	291	446	1.4E-48
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	280	453	7.2E-59
Pfam	PF00563	EAL domain	IPR001633	EAL domain	467	703	3.7E-71
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	462	720	2.2E-93
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	280	451	1.2E-69
CDD	cd01948	EAL	IPR001633	EAL domain	467	708	5.86618E-102
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	203	257	1.5E-5
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	292	448	1.58514E-66
Coils	Coil	Coil	-	-	263	283	-
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	280	712	0.0
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	72	122	5.6E-15
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	287	449	2.2E-45
SMART	SM00052	duf2_2	IPR001633	EAL domain	461	708	3.5E-98
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	296	453	5.36E-52
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	473	715	4.84E-83
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	136	180	4.7E-11
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	286	452	6.5E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.