Pseudomonas oryzihabitans RIT370, UM91_RS14280

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTTCGTCCGCCGGGGCTTGGCAGCGGGGCAGTTGAAGCGTTACTATCCGCAACCCTTAAAAACCGACGCTTCCCGTGCCCTTTTGCCGCTAGCGTTGGA TTAAACCTCGGTAAATTTGAAGGTACGACCTGGATGCCCAACGTCAAAGTCAAAGAAAACGAACCCTTCGACGTAGCGCTGCGTCGTTTCAAGCGTTCCT GCGAGAAGGCCGGTGTACTGGCCGAAGTTCGTAGCCGCGAGTTCTACGAAAAGCCCACCGCCGAGCGCAAGCGTAAAGCTGCCGCCGCGGTCAAGCGCCA CGCCAAGAAAGTACAGCGCGAGCAGCGCCGTCGCGAGCGTCTGTACTGAGTTACAGCGCTCCTCTGGCGTCATCAAACAACCCGACCTCTGGTCGGGTTG TCTGTTTCTGGCCTTCCCGCTTCGCCCTGGCGCTCTCTGGCGCTAGACTGCCCTCCTCGCTCCATCCTCCGCTCCTCGCCCCTCTATCCAGACGCTGACC
DNA Sequence for Gene
>UM91_RS14280
ATGGCCGGACTCATCCCGCAAGGCTTCATCGACGACCTGCTCAATCGCACCGACATCGTCGAGGTGGTGGGCGCGCGGGTGAAGCTCAAGAAGGCCGGCA AGAACTGGATGGCCTGCTGCCCCTTCCATAACGAGAAGACGCCCTCCTTCAGCGTCAGCCCCGACAAGCAGTTCTACTACTGCTTCGGCTGCGGTGCCGG CGGCAACGCCCTGGGCTTCATCATGGATCACGACAACCTCGAATTCCCCGAGGCGGTCGAGGAACTGGCCAAGAAGGCCGGCGTGGACGTGCCGCGCGAA GAGAGCGGTGGTCGACGCAAGCCGCGGCAACCCACGGATTCCCCGCTCTACCCGCTATTGGCCGCCGCCGCCGAATACTATCGCCTGGCGCTGCGCAATC ACCCCAAGCGCCAGGCAGCGGTCGACTACCTGAAAAAGCGCGGCCTCACTGGCGAGATCGCCCGGGACTTCGGCCTGGGCTTCGCCCCGCCGGGCTGGGA CAACCTGGGCAAGCACCTGGGCGGCGACGACCTGCAGCAGAAGGCCATGCTCGATGCCGGCCTGCTGGTGGAGAACGCCGAGAGTGGCAAGCGTTACGAT CGCTTTCGCGACCGGGTGATTTTTCCGATCCGCGACAGCCGGGGCCGGGTGATCGCCTTTGGCGGCCGGGTGCTGGGCGACGACAAGCCCAAGTACCTCA ACTCGCCGGAGACCCCGGTGTTCCACAAGGGCCAGGAACTCTATGGCCTGTTCGAGGCGCGCAAGCACAATCGCGACCTGGACGAGATCCTCGTCGTGGA AGGCTACATGGACGTCATCGCCCTGGCCCAGCAAGGCATCCGCAATGCCGTGGCCACCCTGGGCACCGCCACCAGCGAAGAGCACATCAAGCGGCTGTTC CGCATCGTGCCGAGCATCCTGTTCTGCTTCGACGGCGACCAGGCCGGTCGCAGCGCCGCCTGGCGCGCCCTTGAATCGGCCCTGCCGGTGCTCAAGGACG GCTTCCGGGTGCGTTTCCTGTTCCTGCCCGAGGGCGAGGATCCGGACACCCTGGTGCGCGCCGAGGGCGCCGACGCCTTCCAGGCGCGCTTCGTCCAGCA GGCCCAGCCGCTGGCCGAGTATTTCTTCCAGCAACTGATGCTCGAGGCGGACCCGGCCACCCTGGAGGGCAAGGCCCACCTGGCCACCCTGGCGGCCCCG CTGATCGAGAAGATTCCCGGCAACAACCTGCGCCTGCTGATGCGCCAGCGCCTGAGCGAGCTCACCGGCCTCGGCAACGACGCCCTGAGCCAGCTGGCAC CGTCCGCTCCGCCGCAGGACGCCCCGCCCCTGGACTATGGCGACTACGCCTATGCCCATGCCGAGGAAGCCCCGGCGCAGCAGCAGTGGACGCCCCGCCG CGAAGGCAAGGGCGGGCGTGACGGCAAGGGCTGGAAAAAGGATTTCAACGGCAAGGGTGGCGGCGAACGCCTTCCCCGTCAGCCACCGGTCAAGGTGGAG ACCCCGGTGCTGGCCGCGCTGCGCAGCCTGCTGCACCACCCGACCCTGGCCCAGGCGGTGCAGGACGCCCGCAACCTGGCCGAGGAAAGCGATCAGTACG CCCAGTTGCTGGTTGCCCTGGTCGAGGCGCTGCAGAAGAAGCCCGGGCAGAGCACCCTGGCGCTCATCGCCCGCTGGCACGGCACCGAACAGGGTCGACT GCTGCGCGCTCTGGCGGAAAAAGAATGGCTGATTGCCGGGGACAACCTTGAACAACAGTTTTTCGACACCATAACGAGGTTAGCCGCCAGCCAGCGTGAT CGCCTGCTGGAGCAACTCCTACGCAAGGCGCGACAGAGCGAACTGAGCTCCGAAGACAAGGACCGCCTACGCGAACTCCTCAGCCGTCCGGCGGGGTCCG TGACCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGGCACGACAACCGTCTAACCGGCTATAATGTTCAGCTATTTTTGCCCGCCTAAGCCTTCAGTGGAAGGGTACCTATGTCCGGAAAAGCGCAACAGCAA TCCCGTCTGAAAGAATTGATCGCCCGTGGGCGTGAGCAGGGCTACCTGACTTACGCGGAGGTCAATGACCACCTACCGGAGGATATTTCAGATCCGGAAC AGGTGGAAGACATCATCCGCATGATCAATGACATGGGGATCAACGTATTCGAGACCGCGCCGGACGCCGATGCCCTGCTGCTGGCGGAGACCGATACCGA CGAAGCCGCCGCCGAAGAAGCCGCCGCCGCCCTGGCCGCGGTGGAGAGCGATGTCGGCCGCACCACCGACCCAGTGCGCATGTACATGCGTGAAATGGGT ACCGTGGAACTGCTGACCCGCGAAGGCGAGATCGAGATCGCCAAGCGTATCGAGGAAGGCATCCGCGAAGTCATGGGCGCCATCGCCCAGTTCCCGGGCA
Amino Acid Sequence
>DNA primase
MAGLIPQGFIDDLLNRTDIVEVVGARVKLKKAGKNWMACCPFHNEKTPSFSVSPDKQFYYCFGCGAGGNALGFIMDHDNLEFPEAVEELAKKAGVDVPRE ESGGRRKPRQPTDSPLYPLLAAAAEYYRLALRNHPKRQAAVDYLKKRGLTGEIARDFGLGFAPPGWDNLGKHLGGDDLQQKAMLDAGLLVENAESGKRYD RFRDRVIFPIRDSRGRVIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLFEARKHNRDLDEILVVEGYMDVIALAQQGIRNAVATLGTATSEEHIKRLF RIVPSILFCFDGDQAGRSAAWRALESALPVLKDGFRVRFLFLPEGEDPDTLVRAEGADAFQARFVQQAQPLAEYFFQQLMLEADPATLEGKAHLATLAAP LIEKIPGNNLRLLMRQRLSELTGLGNDALSQLAPSAPPQDAPPLDYGDYAYAHAEEAPAQQQWTPRREGKGGRDGKGWKKDFNGKGGGERLPRQPPVKVE TPVLAALRSLLHHPTLAQAVQDARNLAEESDQYAQLLVALVEALQKKPGQSTLALIARWHGTEQGRLLRALAEKEWLIAGDNLEQQFFDTITRLAASQRD RLLEQLLRKARQSELSSEDKDRLRELLSRPAGSVT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site