Pseudomonas mediterranea CFBP 5447, N005_RS27150

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:1.10.3720.10:FF:000002	D-methionine ABC transporter permease MetI	-	-	12	224	2.3E-88
PANTHER	PTHR30450	ABC TRANSPORTER PERMEASE	-	-	8	223	2.5E-73
Gene3D	G3DSA:1.10.3720.10	-	IPR035906	MetI-like superfamily	14	221	1.2E-42
Pfam	PF00528	Binding-protein-dependent transport system inner membrane component	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	59	222	2.0E-17
SUPERFAMILY	SSF161098	MetI-like	IPR035906	MetI-like superfamily	16	211	3.53E-40
CDD	cd06261	TM_PBP2	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	57	169	3.12032E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.