Pseudomonas mediterranea CFBP 5447, N005_RS27150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mediterranea CFBP 5447 scaffold36, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTGCCCTGGACCCGCAGACCACCGCATCGGTGCTGCAACTGCTGGCCGAAATCAACCGCGAGCTGAAGCTGACTATTGTATTGATCACCCATGAAATGG ACGTGATCCGCCGGGTCTGCGATGAAGTGGCGGTGATGGATGCCGGCGTCATCGTCGAGCAAGGTCCGGTGGCCGAGGTGTTCCTGCATCCCAAGCACCC GACCACCAAGCGTTTCGTCCAGGAAGACGAGCAGATCGACGAAAGCGAACAGCGCGACGATTTTGCCCATGTGCCCGGGCGCATCGTGCGTCTGACCTTC CAGGGCGATGCGACCTACGCGCCCTTGCTCGGCACCGTCGCCCGGGAAACCGGCGTGGACTACAGCATCCTGGCCGGTCGTATCGACCGCATCAAAGACA CCCCCTACGGGCAACTGACCCTCGCCATCACCGGCGGTGACATGGAGGCGGCGTTTGCCCGCTTCACCGCGGCCGATGTCCACATGGAGGTGCTGCGCTG
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| DNA Sequence for Gene |
>N005_RS27150
ATGGAACTGCTGACGAATTTCTTTGCAAACATCGACTGGCTGGAAATCTGGCTGGCGACCGGCGACACCTTCCTGATGCTGTTCGGTTCGCTGCTGTTCA CCGTGCTGCTCGGCTTGCCCCTGGGCGTGCTGCTGTTTCTGTGCAGCCCACGCCAGTTGCTTGAGGCCCGCGGCGTTTATGCGCTGTTGTCGCTGATCGT CAACATCCTGCGCTCGCTGCCGTTCATCATCCTGTTGATCGTGATGATCCCGTTCACGGTGTTGATTACCGGCACCTCGTTGGGCGTGGCCGGGGCAATT CCACCGCTGGTGGTGGGCGCGACCCCGTTCTTCGCTCGCCTGGTGGAAACCGCCCTGCGCGAAGTCGACCGCGGCATCATCGAAGCGACCCAGGCCATGG GCGCAACCACCCGGCAGATCATCGTCAACGCCTTGCTGCCGGAAGCCCGTCCGGGCATCTTTGCAGCGATTACGGTGACAGCAATTACGCTGGTGTCCTA CACGGCCATGGCCGGTGTGGTGGGCGCCGGTGGCTTGGGCGACCTGGCGATCCGGTTCGGTTACCAGCGTTTCCAGACCGATGTCATGGTGGTCACGGTG GTACTGCTGCTGGTGCTGGTCCAGGTCCTGCAAACCGTAGGCGACAAGCTGGTTGTGCATTTCTCTAGAAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCTCGCGCCCATAAACCATGAGCCAGCCATTCGCTGGCAGGCGCCGAGAGCGGGCGCCCCACAAGGAGTTAGCTGAATGAAGAAGTTACTGGTTGCCT TCGCTGCCGCCGCAGCCTTTTCCGCCCATGCCGACACCCTGACCGTCGCCGCAACGCCGGTGCCGCACGCGGAAATCCTCGAATTCGTCAAACCGGCACT GGCCAAGGAAGGCGTGGACCTCAAGGTCAAGGTCTTCACCGACTACATCCAGCCGAACGTACAGGTCGCCGAAAAACGCCTGGACGCCAACTTCTTCCAA CACCAGCTGTACCTGGATGAGTTCAACAAGGCCAAGGGTACCCAGCTGGTAGCCGTAACTGGCGTGCACCTGGAACCCCTGGGCGCTTATTCGAACAAGT ACAAGAAGCTCGAAGAACTCCCTGGCGGCGCCAACGTAGTGATCCCGAACGACGCCACCAACGGCGGCCGTGCGCTGTTGCTGCTGGCGAAGGCTGGAGT
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| Amino Acid Sequence |
>metal ABC transporter permease
MELLTNFFANIDWLEIWLATGDTFLMLFGSLLFTVLLGLPLGVLLFLCSPRQLLEARGVYALLSLIVNILRSLPFIILLIVMIPFTVLITGTSLGVAGAI PPLVVGATPFFARLVETALREVDRGIIEATQAMGATTRQIIVNALLPEARPGIFAAITVTAITLVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMVVTV VLLLVLVQVLQTVGDKLVVHFSRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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