Pseudomonas mediterranea CFBP 5447, N005_RS21070
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mediterranea CFBP 5447 scaffold36, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGCACAGTTCTGGTTGTAGGCCGACGCGCCGATCTCCACCGCCCGGTCATGCTCGGGCGAGGTGCGGTAAGGGTTCACGGAAGCCCAGCCGTCGCCAT CCAACGCGACGCCGGTGTCCTTGATCGGGGTCAGGCCCTTGGTCTCCACTGCCTGGGGCACTACGTTGCCATGGGCCCACACGGAGCCTGCGCCGGTCAG CCCCATCAGCAAAGCGGTAGCGATGATGGCGTTGCGTTTTGTTGTCATTGTTATGCCCTCTGGATTGCACGCTGACCTCTCTACAGAGGCCGTGCCGTCA TCTTAGGAACCGTGCCGTGCCAGCCGAATGCTGCTTTGGTGGTCGGGTTCTAGTTCCTTGGTAGCAGCCCATCCGACGCAGGTCGCAAAGACAGGCGGTT CGGGAAGTCTTCCCGGCAAAGGCGGGACTTTTTCCGTATCGGCGAGCCCCGGCGCGACCCAACCTAGTCGGGCCTAAACCTTTCACTGGGAACTGCCACC
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| DNA Sequence for Gene |
>N005_RS21070
ATGAGAATAAAAACGCTACCCGCCCTCTCCTCCCTGACCGTTGCCTTGCTGCTGGCCGGCAGTCTGTCGCTGAGCCCCTTGGCCAGCGCCGCAGCGCCGG GGGTCAGTTGGGAAGACATCGCCAACGATCACCTGACCACCAAGGACGTGCTCCAATACGGCATGGGCACCAACGCCCAGCGCTGGAGCCCGCTGGCCCA GGTCAACGACAAGAACGTGTTCAAGCTGACTCCAGCCTGGTCCTACTCATTCGGTGACGAGAAGCAGCGCGGCCAGGAGTCCCAGGCCATCGTCAGTGAC GGCGTGGTCTACGTCACCGGTTCCTACTCGCGGGTGTTCGCCCTCGACGCCAAGACCGGCAAGCGTCTGTGGACCTACAACCATCGGCTGCCGGACAACA TTCGCCCGTGCTGCGACGTGGTCAATCGCGGCGCGGCCATCTATGGCGACAAGATCTACTTCGGCACCCTCGATGCGCGCGTGGTCGCCCTGGACAAAAA CACCGGCAAGGTCGTATGGAACAAGAAGTTCGGCGATCACGCCGGCGGCTACACCATGACCGGCGCCCCGGTGCTGATCAAGGACAAGACCAGCGGCAAG GTGCTGCTGATCCACGGCAGCTCCGGCGATGAATTCGGCGTGGTCGGGCAGTTGTTCGCCCGCGATCCCGAGACGGGCGAGGAAGTCTGGATGCGTCCCT TCGTCGAGGGCCACATGGGCCGCCTCAACGGCAAGGACAGCACCCCCACCGGCGACGTGAAGGCGCCCTCCTGGCCCGACGACAAGACCACCGAGACGGG CAAGGTCGAAGCCTGGAGCCACGGCGGCGGCGCGCCCTGGCAGAGCGCCAGTTTCGACCCCGAGACCAACACCATCATCGTCGGCGCGGGCAACCCCGGA CCCTGGAACACCTGGGCCCGGACGGCCAAGGATGGCAACCCCCACGACTATGACAGCCTCTACACCTCCGGCCAGGTGGGCGTCGACCCGAGCACGGGCG AAGTGAAATGGTTCTACCAGCACACGCCCAACGATGCCTGGGATTTCTCCGGCAACAACGAGCTGGTGCTGTTCGACTACAAGGACAAGGACGGCAAGGT CATCAAGGCCACCGCCCATGCCGACCGCAACGGCTTCTTCTACGTCGTGGACCGTAACAACGGCAAGCTGCAGAACGCGTTCCCCTTCGTCGACAACATC ACCTGGGCCAGCCACATCGATCTCAAGACCGGTCGCCCCGTGGAGAACCCCGGCCAGCGTCCGGCCAAGCCATTGCCCGGCGAAACCCGGGGCAAGCCGG TGGAAGTCTCGCCGCCGTTCCTGGGCGGCAAGAACTGGAACCCCATGGCGTACAGCCAGGACACCGGGTTGTTCTACGTCCCGGGCAACCAGTGGAAAGA GGAATACTGGACCGAGGAAGTGAACTACAAGAAGGGTTCGGCCTACCTCGGCATGGGCTTCCGCATCAAGCGCATGTACGACGATCACGTCGGCAGCCTG CGAGCGATGAACCCCAGCACCGGCAAGGTGGTCTGGGAGCACAAGGAGCCGTTGCCATTGTGGGCCGGCGTACTGGCGACCAAGGGCAACCTGGTGTTCA CCGGCACCGGTGACGGCTTCTTCAAGGCGTTCGATGCCAGGACCGGCAAGGAGCTGTGGAAATTCCAGACCGGCAGCGGCATCGTCTCCCCGCCCATCAC CTGGGAACAGGACGGCGAGCAGTACATCGGCGTGACCGTCGGTTACGGCGGTGCCGTGCCGTTGTGGGGCGGCGACATGGCGGAGCTGACCAAGCCGGTG GCACAGGGCGGCTCGTTCTGGGTGTTCAAGATCCCGGGCTGGGACAAGGCCACGGCGCAGAAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCGCCCCCCTCAAAACCTCAACCCAATTCCCCTGTGGGAGCGAGCCTGCTCGCGAAGCGGCGTGTCAGCCTGAATAGATGTCGACTGACACACCGAATC GCGAGCAGGCTCGCTCCCACAGGGTCGACCGAGTCTACTGCCATGAACTACCTGCCCCTGGCATGGGTGCTGCTCGTCTTCAGCGCCCACGCCGACGACA CCGAAGCCCCCCTGACCCTCAACGGCTGCGTCATTGCCGAATCCAGCCAATGCCCCGGCGTCGATCTGCGAGGTGCCCAACTGGCGAACCAGGACCTGCG CAAGATGAACCTCAGCGGCGCGGACCTGCGAGGTGCCGATCTGCGCCATGCGCGGCTGGACCTGGCGAATCTTGAGAAAGCCCGTCTGCAAGGCGCCAAC CTGACCCGCGCCAGCCTGCAACAAAGCAACCTGCGCCTGGCCGACCTGACCAACGCCACCCTCAAGGCTGCCCAGGCCTGGGGGCTGTTCGCCCAGGGCG
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| Amino Acid Sequence |
>quinonprotein alcohol dehydrogenase
MRIKTLPALSSLTVALLLAGSLSLSPLASAAAPGVSWEDIANDHLTTKDVLQYGMGTNAQRWSPLAQVNDKNVFKLTPAWSYSFGDEKQRGQESQAIVSD GVVYVTGSYSRVFALDAKTGKRLWTYNHRLPDNIRPCCDVVNRGAAIYGDKIYFGTLDARVVALDKNTGKVVWNKKFGDHAGGYTMTGAPVLIKDKTSGK VLLIHGSSGDEFGVVGQLFARDPETGEEVWMRPFVEGHMGRLNGKDSTPTGDVKAPSWPDDKTTETGKVEAWSHGGGAPWQSASFDPETNTIIVGAGNPG PWNTWARTAKDGNPHDYDSLYTSGQVGVDPSTGEVKWFYQHTPNDAWDFSGNNELVLFDYKDKDGKVIKATAHADRNGFFYVVDRNNGKLQNAFPFVDNI TWASHIDLKTGRPVENPGQRPAKPLPGETRGKPVEVSPPFLGGKNWNPMAYSQDTGLFYVPGNQWKEEYWTEEVNYKKGSAYLGMGFRIKRMYDDHVGSL RAMNPSTGKVVWEHKEPLPLWAGVLATKGNLVFTGTGDGFFKAFDARTGKELWKFQTGSGIVSPPITWEQDGEQYIGVTVGYGGAVPLWGGDMAELTKPV AQGGSFWVFKIPGWDKATAQK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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