Pseudomonas mediterranea CFBP 5447, N005_RS21070

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005509 calcium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10277
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:2.140.10.10:FF:000003 Methanol dehydrogenase, large subunit - - 33 614 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 411 433 -
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 525 556 7.2E-7
MobiDBLite mobidb-lite consensus disorder prediction - - 240 280 -
PANTHER PTHR32303 QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) - - 25 583 1.1E-52
Pfam PF13360 PQQ-like domain IPR002372 Pyrrolo-quinoline quinone repeat 80 337 1.7E-16
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 313 340 840.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 145 176 3.9E-6
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 95 127 1.7E-6
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily 45 607 0.0
CDD cd10277 PQQ_ADH_I IPR034119 PQQ-dependent type I alcohol dehydrogenase 40 611 0.0
Pfam PF01011 PQQ enzyme repeat IPR002372 Pyrrolo-quinoline quinone repeat 530 566 2.5E-10
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 196 233 200.0
Gene3D G3DSA:2.140.10.10 - - - 34 614 0.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 473 515 86.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 359 395 220.0
NCBIfam TIGR03075 JCVI: PQQ-dependent dehydrogenase, methanol/ethanol family IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family 33 584 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.