Pseudomonas lini DSM 16768, TU81_RS06800

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00317	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006260	DNA replication	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00317	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00317	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain	IPR008926	Ribonucleotide reductase R1 subunit, N-terminal	154	369	3.79E-62
SUPERFAMILY	SSF51998	PFL-like glycyl radical enzymes	-	-	370	908	0.0
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	1	25	-
Pfam	PF02867	Ribonucleotide reductase, barrel domain	IPR000788	Ribonucleotide reductase large subunit, C-terminal	371	907	0.0
Pfam	PF00317	Ribonucleotide reductase, all-alpha domain	IPR013509	Ribonucleotide reductase large subunit, N-terminal	294	365	5.4E-22
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	582	593	7.1E-47
CDD	cd01679	RNR_I	-	-	319	908	0.0
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	685	708	7.1E-47
Pfam	PF03477	ATP cone domain	IPR005144	ATP-cone domain	33	129	1.5E-18
PANTHER	PTHR11573	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN	IPR039718	Ribonucleoside-diphosphate reductase large subunit	150	964	0.0
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	446	465	7.1E-47
NCBIfam	TIGR02506	JCVI: ribonucleoside-diphosphate reductase subunit alpha	IPR013346	Ribonucleotide reductase, class I, alpha subunit, C-terminal	297	908	0.0
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	657	679	7.1E-47
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	619	642	7.1E-47
Pfam	PF03477	ATP cone domain	IPR005144	ATP-cone domain	149	233	6.3E-6
FunFam	G3DSA:3.20.70.20:FF:000009	Ribonucleoside-diphosphate reductase	-	-	219	916	0.0
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	761	788	7.1E-47
Gene3D	G3DSA:3.20.70.20	-	-	-	220	916	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.