Pseudomonas lini DSM 16768, TU81_RS05520

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	466	721	4.45E-86
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	462	726	6.8E-96
Pfam	PF00563	EAL domain	IPR001633	EAL domain	467	703	1.4E-73
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	285	452	2.6E-45
CDD	cd01948	EAL	IPR001633	EAL domain	470	708	6.76389E-108
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	462	718	8.5E-91
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	291	446	2.92625E-61
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	274	451	1.5E-55
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	202	251	7.9E-7
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	73	123	4.4E-15
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	276	718	0.0
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	290	446	4.5E-48
SMART	SM00052	duf2_2	IPR001633	EAL domain	461	708	1.6E-107
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	279	451	9.0E-62
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	295	453	1.88E-48
Coils	Coil	Coil	-	-	262	282	-
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	134	189	1.6E-13
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	286	449	7.2E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.