Strain | Pseudomonas knackmussii B13 complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CAAGCGTACCGGCCCGGACCTGGCTCGCGTCGGCGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTCTACAACCCGCGCAACGTAGTGCCCGAGTCG AAGATGCCGGCCTACCCGTGGCTAGTGGAGAACAAGCTCGACGGCAAGAACACCGCCACCAAGATGGAAGCCATGCGCACCCTCGGCGTGCCCTACACCG ACGAAGACATCGCCGGTGCTCGCGAAGCCGTGAAGGGCAAGACCGAGATGGACGCTCTGGTGGCCTACCTGCAAAGCCTGGGCACCATCATCAAAAGCAA ACGGTGAGTGCAATGGATATCGGAACGATTCGCGGGCTCGGCACCGTCGTGGTGATGGTCGCCTTCGTCGGCGTCCTGCTCTGGGCCTACAGCGGCAAGC GCAAGGCGCGCTTCGACAACGACGCCCTGCTGCCCTTCGCGGACGATCCGGCAGCCATGAAGCACGTAGAGCAAGAACAAGCTTCTAGGAGCAACAAAGA
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DNA Sequence for Gene |
>PKB_RS10575
ATGACAACCTTCTGGAGTCTGTACGTCACCGTACTCACCCTGGGCACCATCTTCGCCCTGGCGTGGCTGCTGTTCGCCACCCGCCGCGGCCAGCGCAGCG AAGCCACCGACGAGAAAGTCGGCCACTCCTTCGACGGCATCGAGGAGTACGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTTCGTCGCCACCTTCAT CTTCGCCCTTGGCTACCTGGCCCTGTACCCGGGCCTGGGCAACTGGAAAGGCCTGCTGCCGGGCTACCAGGAAGTCACCGACGGCAAGCCCTTCGCCAAC GGTCAGCCGGGCTGGACCGGCGTGCACCAGTGGGAGAAGGAGATGGCCAAGGCCGACGAGAAGTACGGCCCGATCTTCGCCAAGTACGCCGCCATGCCCA TCGAGGACGTCGCCAAGGATCCGCTGGCACTGAAGATGGGCGGTCGCCTGTTCGCCTCCAACTGCTCGGTCTGCCACGGCTCCGACGCCAAGGGCGCCTA CGGCTTCCCCAACCTGACCGACGCCGATTGGCGCTGGGGCGGTGCCACCGCCGACATCGAGACCACCATCAAGGGTGGCCGCCACGCCGCAATGCCGGCC TGGGGTGAAGTGCTTGGCGACCAGGGAGTGCACGACGTCGCCGCCTTCGTCACCACCAAGCTGGACGGCCGCAAGCTGCCCGAAGGCGTGACCGACGAGC AGGTCGCCAACGGCCAGAAGATCTTCAGCACCAACTGCGTGGCCTGCCACGGCCCGGAAGGCAAAGGTACCGCCGCCATGGGCGCGCCGAACCTGACCCA CCCGGCCGCGTTCATCTACGGCTCGAGCTTCGCCCAGCTGCAGCAGACCATCCGTTACGGCCGCCAGGGCCAGATGCCGGCCCAACTGGAGCGCCTGGGC GCCGACCAGGTCCACCTGCTGGCCGCCTACGTCTACAGCCTGTCCCACGGCGAAGGCGAGAAGAGCGCCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCCTCTCCCCTCCCCCAGCAATACGCAGCGGCGCCGGTCTTCCCGGCGCCGCTCTATTTCAGGGTCAGAAAAGTCCTAAGATAATTCATACGCGACCA ACAGTCGCACCGTTGCATGGAAGCCCAGGTCGTATCATGGACAAGCGTGCAACCAACTATCGACCCTTTCGGCAAGCACTGACGGGGCGCCCCTCCCACT GCCGTGGTACGCACCGATGAGCAAACAGATTCCCGTGCACGACGTCACGCCGCCCAGCAAGAAAGGCAGCGAGAGCGTCGACCTCTATGCCTCCCGGGAG AAGGTCTATACCCGGGCCTTCACCGGTTTCTTCCGCAACCTGCGCCGCGTGGGCGGTGCCTTCCTGTTCCTCCTCTATTTCGGCACCGTCTGGCTGACCT GGAACGGTCGCCAAGCCGTGTGGTGGGACCTGCCCGAGCGCAAGTTCTACATCTTCGGCGCCACCTTCTGGCCGCAGGACTTCATGCTGCTGTCGTGGTT
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Amino Acid Sequence |
>cytochrome Cbb3
MTTFWSLYVTVLTLGTIFALAWLLFATRRGQRSEATDEKVGHSFDGIEEYDNPLPKWWFMLFVATFIFALGYLALYPGLGNWKGLLPGYQEVTDGKPFAN GQPGWTGVHQWEKEMAKADEKYGPIFAKYAAMPIEDVAKDPLALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWRWGGATADIETTIKGGRHAAMPA WGEVLGDQGVHDVAAFVTTKLDGRKLPEGVTDEQVANGQKIFSTNCVACHGPEGKGTAAMGAPNLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQLERLG ADQVHLLAAYVYSLSHGEGEKSAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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