Pseudomonas knackmussii B13, PKB_RS10575

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00605
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pkc02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pkc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pkc00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00782 JCVI: cytochrome-c oxidase, cbb3-type subunit III IPR004678 Cytochrome c oxidase cbb3-type, subunit III 36 318 1.2E-77
PIRSF PIRSF000006 Cbb3-Cox_fixP IPR004678 Cytochrome c oxidase cbb3-type, subunit III 1 318 2.7E-102
FunFam G3DSA:1.10.760.10:FF:000015 Cbb3-type cytochrome c oxidase subunit - - 224 321 3.7E-47
FunFam G3DSA:1.10.760.10:FF:000013 Cbb3-type cytochrome c oxidase subunit - - 107 223 7.3E-55
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 153 164 5.7E-6
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 108 222 1.7E-32
Gene3D G3DSA:6.10.280.130 - IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily 1 93 6.0E-37
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 144 217 3.3E-13
PANTHER PTHR33751 CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXP - - 39 315 2.2E-60
Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal 37 83 2.3E-22
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 55 219 2.51E-30
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 223 324 3.3E-27
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 230 317 1.28E-22
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 234 311 7.0E-11
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 195 217 5.7E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.