Pseudomonas frederiksbergensis SI8, JZ00_RS16330

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00008, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGTCCGCGCCGTTCATGCCCATCAGGGCGTTGGCCGTCGCCAGGCCCCGGGCAAGCAACAGCGGCGCTTCAAGCTCACGCTGGATCAGGCTGGCCTGGG TGTGGGCGAGGGCGCTGAGGCGTTGTTCGATGAGTTGTTCGAATTGCACCTTGGTCCGCTGCTGCACCATTTCCTGGGTGCGGGCGCCGGCGAACAATGC GTAAAGCACCAGGGCGCCGACCACGCTGAGCACGATGGCACCGGCCAGGGCAGCAACGGAAAACTGGATCGATCTGAATTTCATAAAGGCACCGGACCTG AAATGACGTCTGGTCCTTGTATCGGCATTTCCGTGGCCCGGCATGAGACGCTGTTCGTCGGATGACTGTTTTGGCTGGATGGGTGTCGCAAATGGATGAG TGGGACCTGTCCGAAAAACCTGTAATCCCTCGCTGTGTATCTGGCGCCGATACAAATCAAGGCCTAGGATACGCCCACGATTCCATGGAGCTTCTTTTGT
DNA Sequence for Gene
>JZ00_RS16330
ATGAACAAGACTTTGATGGTGAGCGCTCTGGGCGCGGCCCTGCTGCTCGCCGGTTGCCAATCAGTCAATACCACCAGCGGCGGAGCCGTGGGCGTGGAGC GCAAGCAGTACATGTTCAGCATGCTGTCGACCGCCGAGGTCAACCAGATGTACGCCCAGTCCTATCAGAAGACGTTGGGCGAGGCGAGCTCCCAAGGCGC CCTGGACAAGACCAGTAGCGACGCCAAGCGCCTGCAGGTCATCGCTGACCGTCTGATCGCCCAGGCGCCGGTGTTCCGGCCGGACTCGGCGCAGTGGAAC TGGGAAGTGAACCTGATCAAGAGCGATGAACTCAACGCCAATTGCGGGCCCGGCGGCAAGATCATGTTCTACAGTGGCCTGATCGACCAGCTGAAACTGA CCGATGCGGAAATCGCCGCGATCATGGGCCATGAAATCGCCCACGCCTTGCGCGAGCACGGTCGCGAAGCCATGTCCAAGGCCTATGGCATCGAAATGGC CAAGCAGGGTGCCGGTGCGATATTCGGCCTGGGCCAGGACAGCCTGGCGCTGGCCGACACGGTCGCCAACTATGGCATGACCCTGCCCAACAGCCGCGGC AACGAAAACGAAGCCGATCTGATCGGCCTCGAACTGGCGGCCCGTGCCGGCTACGACCCGAACGCCGCGATTACCCTGTGGAACAAGATGGCCAAGGCTT CGGAAGGCGCTCCGCCGGAGTTCATGAGCACCCACCCATCGTCCAGCAGCCGGATCGCCTCGTTGCAGGCGGCGATTCCGAAGGTGATGCCGCTTTACCA GCAGGCCAAGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCATCGTCATCCGGTGAACTGTTGTTGTGGCGAGGGAGCAAGCGCCCTTGCCACAACAGCATCAAACCCACCCACTGCTCTGCATCGCCTTGTACACCGC CACGATTGCCAGGATGAAAAACGCCGAGGCGGCCAAGCGACGGATGAGAGCCAGGGGCAGTTTCTCGGCGGCGAAGTTGCCCGCCAGTACCACCGGCACG TTGGCAATCAGCATGCCCACGGTGGTGCCAATGATCACCAGCCACAGTTCCGGGTATTGCGCGGCGAGCATCACCGTGGCGATCTGGGTCTTGTCACCGA TTTCCGCGAGGAAAAACGCGATCAGCGTGGTCAGGAACGGGCCGAATTTGCGGGCCGTATTCGCCTCTTCATCGTCCAGCTTGTCCGGGACCAGGGTCCA CAGTGCCGTGGCCGCGAAGCTTGCCGCCAATATCCAGTGCAGCACCGCATCGGAAAAGAACCCGCTGACCCAGGCCCCGACCGCGCCTGCCGCCGCATGG
Amino Acid Sequence
>peptidase M48
MNKTLMVSALGAALLLAGCQSVNTTSGGAVGVERKQYMFSMLSTAEVNQMYAQSYQKTLGEASSQGALDKTSSDAKRLQVIADRLIAQAPVFRPDSAQWN WEVNLIKSDELNANCGPGGKIMFYSGLIDQLKLTDAEIAAIMGHEIAHALREHGREAMSKAYGIEMAKQGAGAIFGLGQDSLALADTVANYGMTLPNSRG NENEADLIGLELAARAGYDPNAAITLWNKMAKASEGAPPEFMSTHPSSSSRIASLQAAIPKVMPLYQQAKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site