Pseudomonas frederiksbergensis SI8, JZ00_RS16330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006508 | proteolysis |
Inferred from Sequence Model
Term mapped from: InterPro:PF01435
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0004222 | metalloendopeptidase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01435
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01435 | Peptidase family M48 | IPR001915 | Peptidase M48 | 74 | 257 | 6.8E-31 |
| Gene3D | G3DSA:3.30.2010.10 | Metalloproteases ("zincins"), catalytic domain | - | - | 68 | 159 | 3.8E-9 |
| PANTHER | PTHR22726 | METALLOENDOPEPTIDASE OMA1 | - | - | 12 | 269 | 7.3E-56 |
| CDD | cd07331 | M48C_Oma1_like | - | - | 81 | 262 | 7.14206E-81 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.