Pseudomonas frederiksbergensis SI8, JZ00_RS08390
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas frederiksbergensis SI8 - Assembly GCF_000802155.2
GCF_000802155.2|latest |
| Locus Tag |
JZ00_RS08390
|
| Name |
Synonym: JZ00_23620 |
| Replicon | contig00003 |
| Genomic location | 519492 - 520952 (- strand) |
Cross-References
| RefSeq | WP_039593613.1 |
| GI | 746563534 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -17.93 |
| Kyte-Doolittle Hydrophobicity Value | -0.336 |
| Molecular Weight (kDa) | 53.5 |
| Isoelectric Point (pI) | 4.69 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000080 (805 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: JZ00_RS08390
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.