Pseudomonas fluorescens AU5633, AA066_RS08805

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:2.180.10.10	-	-	-	624	928	8.5E-41
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	817	856	1.7E-4
Gene3D	G3DSA:2.180.10.10	-	-	-	938	1402	1.6E-97
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	693	727	1.6E-7
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	796	826	8.9E-7
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	775	815	5.1E-9
Pfam	PF03527	RHS protein	IPR001826	RHS protein	1299	1331	1.1E-16
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	859	892	6.0E-4
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	1216	1247	7.0E-5
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	945	985	1.5E-5
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	838	874	1.1E-6
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	991	1022	5.1E-5
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	693	722	2.6E-6
PANTHER	PTHR32305	-	-	-	1299	1403	8.5E-37
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	1216	1248	4.5E-7
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	1012	1049	2.2E-5
Pfam	PF20148	Domain of unknown function (DUF6531)	IPR045351	Domain of unknown function DUF6531	400	473	1.0E-18
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	755	789	1.4E-6
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	971	1002	1.8E-5
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	971	1004	6.6E-7
NCBIfam	TIGR03696	JCVI: RHS repeat-associated core domain	IPR022385	Rhs repeat-associated core	1324	1403	3.4E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.