Pseudomonas fluorescens AU5633, AA066_RS16360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU5633 Contig_52, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGAACTGGCCGTCGCCGTCCTTGTCGGCCTCGTGGCCGTCGGTGCCGAAATTTTGCGTCAGGCTGACATGGCTGTCGAAAGACAGCATGCGTTCGTGCA GCTCATCGGCCTGCTTCATGACTTTGGCCGGGTAGCCGAGGTCGTCCTTGAACCAGTGGTGCCACACGGCAAAGCCTGCACCGGCGCTGATCGCCAGGGC CAACGGCAGGCCGATGAATAGAGCCTTTTTCGAACGTGGTTTTGTCATTGCCATCTCAGTCAGGTTCGCCATCGAGGTGCAGGCGCGGGGGCCTTCGCTA TCTGGGAAGAACGAGTGGTTGGCCGTGGAATTTAGGTTGCCAGGTTAAAAGATCGCAGCCTGCGGCAGCTCCTACATTGGAACGCGATCACTGTAGGAGC TGCCGAAGGCTGCGATCTTTTCAAACCCACATAAATTTACCCGCGCAACAAACGTTCTAGCTTGGATAAAGCCTGCTTCATGGCTGACACAGGTAGGGCA
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| DNA Sequence for Gene |
>AA066_RS16360
ATGAAGATTTCTCGACGATGGTTCATGGCGGGCCTGGCGCTGACCGGCGCTGCCGTGCCTGCGGCGTATTTCGGGCATCGTGAATGGACGAAGCCGGACC CGACGATCACCCCGGGCGAAGCGTCTTTCGACGTCGCGGACAGGGCCGGGCAGCGCTTGGCAAATGCGTTGCGCGGGGTGTGGGATATCCGTTTCGAAGG TGCCGATGCCGGTCTCGAAGGCTTGCCACCCAAGGGTCTGCAAGTGTTTCTCGACATCGGCCAGAAGGGGCGCGGGGTGTGCGGTTTTCTCGACACGCCC GAGCGCCTGCGTTCCGCTGAAACCCCGCGTTACCGGATTCTTGGCGACCTCGCGAAAGCCGATGCGGCGAAGTTGAGTTGGCGCCTGATCGGTGCCGATG GCCAGATCAGCTATGAGCTGGAGATGATCCTCGATGAGGTCTGGGCCGACTTCGGCAATGCCGGCAGTGGCACCCTCAGCGGCAAGGCCTTGCGCCTGGA CCGGTCGCTGGCCTTGCCGGCGCAGGACAACCGCTTTGTCGCCGTCAAGCGGCTGTTTCCCGAAGCGCGCGAGCGCACGCCGCTCAACCCGACGTTGCTG GCGTGGTTGATCTCGCCCGAGCATCGCCTGTTTCACCAGTTGTGGCATGCGACCCGGGACAAGTGGCACAAGCTGCCCGAGGACAAACGCGAAGCCTTGC GCGGTATCGGCTGGCAGCCCGGCCCGCGCGACAAGGAGCGCGATGCCCGAGGCCCGCGCAAGGATCGCAATGGTTCGGGCGTGGACTTTTTCTTCATGCA CCGGCACATGCTCGGGACGGCGCGGTCGATGCAGGATCTGCCGTCGTGGGAATTCTTCCCGCTGCCGCAGCCGGAGCTGATCCGCGACCGCGTCGGCTTC GCCCGCTATTTCGACAACCACGACGGCTCAGCCTTGCCACCCACCTGGACGGCGGCGGGCGATGACGAATTCAGCCAATGGGTCAGCGACATCAAGACCG CCGAAACCTACGAAAGCAACTTCCAGGTCTGGGAGTCGCAGTACCGCGATCCGGCGTATCTGGCCCGGCTCACCCTCGGCCAGTTTGGCTCCGAAGTCGA ACTGGGCCTGCACGACTGGCTGCACATGCGCTGGGCCTCCGTGCCGCGCGATCCGTCCAACGGTCAGCCGGTGCCATTTGCCCGCGATCCGGCGGACTTC GCGGCCCGCTGGTACAACGCCGAAAACGACTTCCTTGGCGATCCGTTTTCTTCCCACGTCAACCCGACGTTCTGGCATTTCCATGGCTGGATCGATGATC GCATCGAGGACTGGTTCCGCGCCCACGAGCGTTTTCACCCGGGCGAAGTCACGCGGCTGCAGGTCAATGGCGTGCCATGGTTTGCCCCGGGGCGCTGGGT GGAAGTCGATGACCCGTGGCTCGGGCCGATCACCCATGGTTGCAGTACCACGCCGGGATTGCAGGTGGGCAAGTCGGTGGAGATGGATCCGGAAACCATG AAGCTGGCGCTGCGCATCACCTTCATCACCGACGAGGAAAAACTCGCCGGCCTGTTCCGTCGCGTGCCGCAACGGCCATGGTATGCGCGCAATCTGAAGG CTAAAACCAGCTCGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
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| Amino Acid Sequence |
>PvdJ/PvdD/PvdP-like protein
MKISRRWFMAGLALTGAAVPAAYFGHREWTKPDPTITPGEASFDVADRAGQRLANALRGVWDIRFEGADAGLEGLPPKGLQVFLDIGQKGRGVCGFLDTP ERLRSAETPRYRILGDLAKADAAKLSWRLIGADGQISYELEMILDEVWADFGNAGSGTLSGKALRLDRSLALPAQDNRFVAVKRLFPEARERTPLNPTLL AWLISPEHRLFHQLWHATRDKWHKLPEDKREALRGIGWQPGPRDKERDARGPRKDRNGSGVDFFFMHRHMLGTARSMQDLPSWEFFPLPQPELIRDRVGF ARYFDNHDGSALPPTWTAAGDDEFSQWVSDIKTAETYESNFQVWESQYRDPAYLARLTLGQFGSEVELGLHDWLHMRWASVPRDPSNGQPVPFARDPADF AARWYNAENDFLGDPFSSHVNPTFWHFHGWIDDRIEDWFRAHERFHPGEVTRLQVNGVPWFAPGRWVEVDDPWLGPITHGCSTTPGLQVGKSVEMDPETM KLALRITFITDEEKLAGLFRRVPQRPWYARNLKAKTSSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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