Pseudomonas fluorescens AU5633, AA066_RS16360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Inverted repeat: AAAAGATCGCAGCCT-N45-AGGCTGCGATCTTTT 56093 56167 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: CGGCAGCTCCTACA-N15-TGTAGGAGCTGCCG 56109 56151 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: TCATCGGCCTGC-N91-GCAGGCCGATGA 56297 56411 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: GCCGTCGTGG-N68-CCACGACGGC 55087 55174 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: CCTTGCGCGG-N49-CCGCGCAAGG 55251 55319 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: CGGCAAGGCC-N20-GGCCTTGCCG 55495 55534 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: TGTGGGAGCTGGCTTGCCAGCGAT-N42-ATCGCTGGCAAGCCAGCTCCCACA 54086 54175 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: ATCGCTGGCAAGCCAGCTCCCACA-N43-TGTGGGAGCTGGCTTGCCAGCGAT 54152 54242 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: TGTGGGAGCTGGCTTGCCAGCGAT-N42-ATCGCTGGCAAGCCAGCTCCCACA 54219 54308 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details