Pseudomonas fluorescens AU7350, AA040_RS07990
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU7350 Contig_47, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGAAGCCCTGCGCCTGCAACAAACGGTGCCGGTGATGCTGATGTCGGCGCTGGGCAACGAGCAAGACCGCATCAGCGGGTTTACCCGGGGGGCCGATG ATTACCTGCCCAAACCTTTCAGCCTGGCGGAGCTCGATGCACGCACCGACGCGCTGCTGCGGCGCATGTCCATGCTCACGCAAGCGCCCGTGCCGACTCG CCACAGTGCCCTGAGCTACGATGACGCCGCACAAGATGTACTGCACGACGGTCTCCGGGCCGGGCTCACGGGGTCGGAGTTCCGCCTGCTGGTGACCTTG CGCGAACAGGCCGGGCAGGCTTTGAGCAAAGCCTTTTTGTACCAGCACGTATTGCACCGCATCTACACGCGACTGGATCGCGGTCTGGATGTGCATGTGT GCAACCTGCGGCGCAAACTGGCGGCCATTGGCGTGCACCATGTGCAGATACAATCGGTGCGCAGTCAGGGCTACATTCTGGTCGAGTCGGACCCCGCCTG
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| DNA Sequence for Gene |
>AA040_RS07990
ATGCGTCGTCACCCGCTGCTGTGGAAGTTGGCGCTGTTACAAGTCAGCTTTTGCCTGTTGTTGACCTGGTTTATCTGGATCTGGGGTCTGTCGGCCGAAC GCAGCACGTATTTCCTGTCGCCCCAAGAGCGCGCGTATTTGCAGGCATATGCCCGGCAGGCGCAGGACACTTGGCGCGAGCACGGCAGCGAGGGACTCGA ACGCTTCACCGAACGCTTGTCCGCCCGTGAACAGACGTGGGTCGCGGTGCTCGGTCCGCAGCTCGAAAGTCTCAGCCGCACGCCCATCACGCCCGCGCAT TACCAGCAACTGACGTTCATGCGCAAACTCGACTGGCCCATGAGTCGACGCCTGATGGACGAGTTGCCTTACGTGAGCATCCCGTTCCCGGACCATCCGG AACAGGGGCAACTGGTGCTTCAACTGCCCGAGCGTCTGCTGCCCAACGGCTTGACCGCCTGGACCCACGTCTTCAGCCACGGCGTCATGCCGACCCTGCT CGCGGCCCTGCTTGGCCTGGTGCTGTATCGACATTTAGTGGTGCCACTCAATCGACTGCGTGATCGCGCCGACGCATTGCGCGCCGACGACCTGGACAGC GAAGCGCCGCTGCCCCTGATCCACCGCCGCGACGAACTGGGCGAATTGGCGCACGCCTTTGAACACATGGCCAGCCGCTTGCGCAACAGCCTCAACCAGC AACGCTTGTTGCTGCGCACCCTGTCGCACGAACTGCGTACCCCGCTGGCACGCTTGCGTATCGCCCATGACAGCCAACTGCCGCCCCTGCAATTGCGCCA ACGGCTGGACCGCGAAATCGATGACATGCAGCGGTTGCTCGAAGACACCCTCAACCTCGCCTGGCTCGACACCGAACGCCCGCAGCTCGCCCGAGAACCC GTGTTGGTGCTGTCGGTGTGGGAAGCCCTGCGCGAAGACGCCTGTTTTGAAAGCCAGTGGCCCGCTGAACGCCTGCCCTGCCTGCTGGGCACTGACTGTT GCGTCAACGTTAACCTCGACAGCTTGGCCCAAGCGCTGGAAAACCTGCTGCGCAACGCCATTCGCTATTCACCGTTGCAAGGCACGGTGACGCTGAGCGG CTGGCGTGAAGGCGATGCGTGGCATTTGTGCCTGAAAGACGAAGGCCCCGGCGTGGCCCCTGAAGACCTTGACACCCTGTTTGTACCCTATCAGCGCCTG CCCGACTGCATAGGCGAAGGGTTCGGGCTGGGGCTGGCCATTGCCCAGCGGGCCATCGAACTGCAACAAGGCCGGTTGTGGGCCACCAATGGCCATCCCG GTTTGTGCATGCACCTGTTGCTGCCGGCTGCGCTGAATGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGTTGCCAGAGTGGACTCATCAGTCAAATGCCTCGGACATCGGATGGTACGCAGGGTGCAAGAGCAGCAGCCAGGGCCCATGGCGCGCAAGTGTTTAG AAAGTTAATGCGCTTTACTCTCAATTAGCAGTCATTATCATTCGTAATCTTCTTGTATCAGGCTGTCTCGGAGATCGCTGATGTCGTTACGTGTGTTGCG CCCTATCGCCCCTTTTGTGTTGTCCGGTTGCTGGTTGTTGAGCGCCGCGGTGCAGGCTGCCAATGAGGATGAAGTCACCTCCGCGCCCGCGCTTGAGCTG GGCAATACCCATGTGGTGGCCACCGCGCAGGAAGAAACCCGGCAGGCCCCCGGCGTGTCAGTGATCACGGCTGAAGACATCAAGAAGCGACCCCCGGCCA ACGACCTGTCGCAGATCATCCGCACGATGCCCGGCGTCAACCTCACGGGGAATTCAACCAGCGGCCAGCGCGGCAATAACCGGCAGATCGACATTCGCGG
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| Amino Acid Sequence |
>histidine kinase
MRRHPLLWKLALLQVSFCLLLTWFIWIWGLSAERSTYFLSPQERAYLQAYARQAQDTWREHGSEGLERFTERLSAREQTWVAVLGPQLESLSRTPITPAH YQQLTFMRKLDWPMSRRLMDELPYVSIPFPDHPEQGQLVLQLPERLLPNGLTAWTHVFSHGVMPTLLAALLGLVLYRHLVVPLNRLRDRADALRADDLDS EAPLPLIHRRDELGELAHAFEHMASRLRNSLNQQRLLLRTLSHELRTPLARLRIAHDSQLPPLQLRQRLDREIDDMQRLLEDTLNLAWLDTERPQLAREP VLVLSVWEALREDACFESQWPAERLPCLLGTDCCVNVNLDSLAQALENLLRNAIRYSPLQGTVTLSGWREGDAWHLCLKDEGPGVAPEDLDTLFVPYQRL PDCIGEGFGLGLAIAQRAIELQQGRLWATNGHPGLCMHLLLPAALNE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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