Pseudomonas fluorescens AU7350, AA040_RS07990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00304 HAMP_11 IPR003660 HAMP domain 177 232 8.9E-12
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 282 443 2.23E-28
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 374 388 5.4E-5
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 337 445 1.1E-24
SUPERFAMILY SSF158472 HAMP domain-like - - 177 230 4.18E-9
Gene3D G3DSA:1.10.8.500 HAMP domain in histidine kinase - - 177 227 3.4E-11
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 233 292 4.7E-8
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 341 442 1.2E-11
Coils Coil Coil - - 266 286 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 406 424 5.4E-5
Pfam PF00672 HAMP domain IPR003660 HAMP domain 175 228 3.1E-13
Gene3D G3DSA:1.10.287.130 - - - 228 289 1.1E-5
CDD cd06225 HAMP - - 182 227 4.8331E-10
PANTHER PTHR44936 SENSOR PROTEIN CREC - - 48 442 1.0E-45
Pfam PF16750 Sensor domain of 2-component histidine kinase IPR031930 Two-component histidine kinase, sensor domain 38 148 2.9E-35
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 216 291 1.49E-9
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 327 446 1.5E-24
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 231 287 4.48809E-7
Gene3D G3DSA:3.30.450.170 - IPR038428 Two-component histidine kinase, sensor domain superfamily 26 149 5.2E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.