Pseudomonas fluorescens C3, VC34_RS10845

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAAGCCCCGGTTTACGGCCTTTTTTCAATTGGCACGACGCTTGCTATGTCCATGTTACGAAAAATCAGGTCACCCGAAGGTTTCCGACATGAGCATCAG CTTCGATAAAGCGCTCGGTATCCACGAACAAGCCCTGGGCTTCCGCGCTCAGCGTGCCGAAGTCCTGGCCAACAACATCGCCAACGCCGACACCCCGAAC TACAAGGCTCGGGATCTGGACTTCTCGAAAGTGCTTGCCGAGCAGAACGAGAAGACCAAGAGCGGCACTTTCGCCTTGAACATGACCAACAGCCGTCATA TCGAAGCCGAAGGCCTGGGCAATGGCGACGAGTCGCTGCTGTATCGCACGCCGATGCAACCCTCGATCGACCAGAACACCGTGGACGCCCAGCTGGAACA GTCGAACTACGCGGAAAACGCGGTCAACTTCCAGGCCAGCTTCACCCTGCTCAACAGCAAATTCAAAGGGCTGGTGTCAGCCCTTCGTGGAGAGTAAGTC
DNA Sequence for Gene
>VC34_RS10845
ATGTCTCTAGCCAGTGTTTTCAACATTGCCGGTAGCGGCATGAGTGCCCAGACCACTCGCTTGAACACCGTCGCCAGTAACATCGCCAACGCCGAGACCG TCTCGTCGAGCATCGACCAGACCTACCGTGCCCGCCACCCGGTATTCGCCACCATGTTCCAGGGCGGCCAGAGCGGTGGCAGCGATTCGCTGTTCCAGAA CCAGGACGCGGCCGGTCAAGGCGTGCAAGTGCTGGGCGTGGTCGAAGACCAGAGCAACCTTGAGGCACGCTACGAGCCGAACCATCCGGCGGCCGACGCC AAGGGCTACGTCTACTACCCGAACGTCAACGTGGTGGAAGAAATGGCTGACATGATTTCCGCGAGCCGTTCGTTCCAGACCAACGCCGAAATGATGAACA CTGCCAAAACCATGATGCAAAAGGTCCTGACCCTCGGTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGGGCGACTCAGATGAGTGTTACCGATACCACCAGTGGTTTGAGCCTCAAGGATATCCTGGCCAACTCCTCGATCAAGACCAGCACCAGTGCCGATG GCTTGGCGTCGGCGACGAACAGCGCCACCGGCAAAAAGGCCCTGGGCAAGGACGCGTTCCTGCAGTTGCTGGTAACGCAACTGAAAAACCAGAACCCGCT GGAGCCGCAAGACAACGGTGCGTTTGTCGCCCAGTTGGCGCAGTTCAGTAGCCTGGAAGGCATCACCACGCTCAACGACACCGTCAGTGGCCTGGCGAGC AATTACAACTCGTCCCAGGCATTGCAGGCGTCGTCGCTGGTCGGACGTTCGGTTATTGCACCGACCGACAAGGCTGTGGTCGATACCTCCAAGAGTTTCA GCGGCACCATTGCCGTACCGGCGTCGACGGACCCGGTCAAGGTCAAGATCACCGATGCCGGTGGCAAGGTTGTCCGCACCATCGACCTGGGCAGCCAGGT
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLASVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSDSLFQNQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADA KGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site