Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS08745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF05488 | PAAR motif | IPR008727 | PAAR motif | 154 | 200 | 1.6E-8 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 559 | 599 | 2.9E-6 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 470 | 506 | 0.0043 |
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1285 | 1304 | 3.7E-11 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 687 | 722 | 1.1E-4 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 728 | 768 | 4.8E-8 |
| Gene3D | G3DSA:2.60.200.60 | - | - | - | 146 | 211 | 4.7E-12 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 653 | 684 | 1.6E-4 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 632 | 663 | 3.3E-6 |
| PANTHER | PTHR32305 | - | - | - | 589 | 1321 | 1.9E-34 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 930 | 1317 | 1.1E-78 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 870 | 902 | 0.002 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 769 | 929 | 1.5E-21 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 470 | 506 | 4.8E-7 |
| Pfam | PF03527 | RHS protein | IPR001826 | RHS protein | 1212 | 1247 | 1.2E-14 |
| NCBIfam | TIGR03696 | JCVI: RHS repeat-associated core domain | IPR022385 | Rhs repeat-associated core | 1238 | 1317 | 1.1E-25 |
| CDD | cd14742 | PAAR_RHS | - | - | 76 | 211 | 2.21266E-22 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 1125 | 1156 | 3.4E-4 |
| Pfam | PF20148 | Domain of unknown function (DUF6531) | IPR045351 | Domain of unknown function DUF6531 | 278 | 357 | 4.3E-22 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 644 | 679 | 3.1E-7 |
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1262 | 1282 | 3.7E-11 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 770 | 799 | 0.0032 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 511 | 714 | 6.8E-29 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 686 | 726 | 6.0E-5 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 802 | 832 | 0.0084 |
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1205 | 1225 | 3.7E-11 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.