Pseudomonas fluorescens MEP34, RU10_RS24245

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_38, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGATGTTCAGGTCCGGCATCGGACGGGCTTCGCCTTCGAACTCGGTATCGACGCCGGCCATGATTTTCAGCAGCGTGGATTTACCCGAACCGTTGAGGCC GAGCACGCCGATCTTGGCGCCGGGGAAGAAGGACAGCGAAATGTTCTTGAGGATTTCCCGCTTCGGCGGAACAACTTTGCCCAGCCGATGCATGGTGAAG ACGTATTGAGCCATGGAGAACCTTGGGTCAGTGACAGATGAATGATTGGAGCGCAGGCGATGCCTGGCCAGACTGTGCGCGTCGTTCACTTGATCACGAT CAATGCGTGCGCGCTGGAAAAAGTCTGATTGTAGGGGCTGGAACGCCCCCGTCTAACCGGCAAAGCTACCTGAATGACCGGTGGCAGTCCAGCCGAGAGG GGCTGGCACTTCGCCACAACTCAAGGCATGCTAGCCGCCCTTCGGGCGTCCGGCTTATAGTGCACGTCGCGCCAGTCCAGCCAAATCGCAGGATCACAGC
DNA Sequence for Gene
>RU10_RS24245
TTGACCAATGTCACTCCGCCAGCCTCTGTGAGCAGCACCCCACCGGCGCCCGGCTCGCCCCTGCGCGGGACATTGAAGGGGGCGCTGGCCACCCTCGTGC TGTTATTGCTCGCGTTGCTGTTCTGGCAACTGCTCGATCAATTGCGTGAAACCCAGAAGAACCAGCGCCAGTACACCATCGACTACACCGCCGACCTCGC CGCGCAAGTCAGCCTGAACATGGCGCTGAACGCGCAAATCGCCCTCAATCTGCTACCGATCGTCGAGCAACCGCAAACCGCCGACGAACAGCAGATGCTC TTGCGCAAACTGCAGCGCTCGCTGCCCGATCTGCGCAGCATGGCCCTGCTCTCGCCCTCCGGCCGGATCATCAGCGACAGCGCCAGCGACAGCTCCGACG CCGATTACCTGACCGAACTGGTACGCCGCAGCCGCGCCCAGGCGCATTACTTCAGCAACGCCGATGACGGCTCGGTGGTGCACCTGCTGTTGCATCAGGC CAGCGGCAGCAGCCGCGGTTACTGGGCGTTGCGCCTGACGCCGACGTTCTTCGACTCGCTGACCAAACAGGACGCCACCGCCCTGCGCCCATTGTGGCTG GTGGAAAACCGCCTCAATCACCAGATCATCAGCCGCGAAGCCGGATTGCCCTCGGCCAAGGCTGGCGGGCTGACCCCCGACGATGTCGCCAACACCGTGC TGACCGTGCCGCTGAGCAGCAGCGACTGGCAGTTGCGCGGGCTGTTCGACCGCCAGCGCGTGCTGGAAGAATTGCTGCCGGCGTTCATCGGCAAATGCCT GCTCGGCCTGGCGTTCTCGATGCTGCCGGTGATTGCCCTGCTCAACATGCGCCGCCGCCAGCGCCAGGTGCATGAAGGCCGGCGGCGCTATCAGGATATT TTCGAAGGCACCGGCGTGGCCTTGTGCGTGCTTGACCTGTCCGGGCTCAAGCAGATGTTCGACAAGGCGCAGATCCAGACCAGCGACCAGCTCAAGGCCT GGCTCGACCAACCGCAGCAGCGCCAGCAATTGCTCGCGGAAATGCGCGTCACTGAGGTCAATCAGGTCGCCCTGCAACTGCTCGATGTGCATTCCTGCGA CGATGCCTGGCAACTGCTGATCGACGGCCAGCGCCATCCGCAGTGCGCGATTGGCCAGCAGATTCTCGACGCCGTCCTGCAGCAGCAGAAACAACTGGAA CTGGAAATCAAGCTGCCCAACAGCAACGGTCGCGACCAGCACCTGTGGATGGTCCTGCGCCTGCCGAGCGAGCAGCACGACTATAAAGCGGTGATCCTCA GCATCAACGACATCACCAGCCGCAAGCTGATCGAGCTGTCGTTGCTGGAGCGCGAAGGTTTCTGGTCGGACGTGGTGCGCACCGTGCCGGATCATCTGTA TGTGCAGGACGTGATCAGCCAGCGGATGATTTTCAGCAACCACCACCTCGGCCAGACCCTCGGCTACAACCGCACTGAACTGCATCAGATGGGCGAATAC TTCTGGGAAATCCTCCTGCACCCGGAAGACGCCGACTATTACCATCGTTCGCGGCAGTTGCAGCGCCACGCCGGTTACAGCCAGCTGTTGCAATGCCAGC TGCGCTTCCGCCATCGCGACGGCAAGTGGCGGCGCTTCGACATTCGCGAACAGGCGCTGGCGCGGGACAAGCACGATCAGGTCACGCGGATCATCGGCGT GGCCAAGGACATCACCGAACAGATCGAAGCCAGCGAATCGCTGCGTGACAGCGAGCAGCGCTATCGCATGCTCGCCGAAAGCATCAGCGACGTGATTTTC TCCACCGACTCCAAGCTCTCGCTGAACTACGTCAGCCCGTCGGTGCAGGCCGTGCTTGGCTACAACGCCGAATGGATTTTCCAGAATGGCTGGCAATCGA CCATCGCCAACCCCGGGCAGTTGAACGGCATCTACACGCTGATGGACCGCGTCAGCAAGGCGCTGGACAAGCCCGAGCAACTGGCATTGCTGCGCAGTCA GGTGCAAACCCAGCTGTTCCTGTTCGACTGCCTGCGCGCCGACGGCCGGAAGATTCCGATCGAACTGCGCCTGGTACTGGTCTGGGACGAACACGGCGCG TTCGAAGGCGTGCTTGGCGTCGGCCGCGATATCAGCCAGCAGCGCCGTGCCGAGAAAGACCTGCGCATGGCCGCCACGGTATTCGAGCACTCGACCTCGG CGATCCTGATCACCGACCCGGCCGGCTACATCGTCCAGGCCAACGAAGCGTTCAGTCGGGTCAGCGGTTACACGGTCAGCGAAGTCCTCGACCAATTGCC GAACATGCTCACCGTCGACGAGCAGCAGGACGCGCACCTGCGCTACGTGCTCAAGCAGTTGCACGAGCACAGCACCTGGGAAGGCGAAGTGTGGATGAAG CGCCGCAACGGCGAGCATTACCCGGCGTGGGTCGGCATCACCGCGGTGCTCGACGACGAAGGCGATCTGGCCAGTTACGTGTGTTTCTTCAGCGACATCA GCGAGCGCAAGGCCAGCGAGCAGCGCATCCACCGCCTTGCCTACTACGACGCCCTCACCCACCTGCCGAACCGCACGCTGTTCCAGGACCGTCTGCACAC CGCACTGCAAGCGGCCGAACGGCAGAAGTCGTGGGTGGTGCTGATGTTCCTCGACCTCGACCGTTTCAAACCGATCAACGACTCACTCGGCCACGCCGCC GGCGACCGCATGCTCAAGGATATGGCCACGCGTCTGCTGGCCTGCGTCGATGACGACGACACCGTGGCGCGGATGGGTGGTGACGAATTCACCTTGCTGT TGCAGCATCGCTCCAGCCGTGAACTGGCGCTGAACCGGGCGATTCATGTCGCCGAGCAGATCCTCGCCAGTCTGGTGCGGCCGTTCGTGCTGGAGGGCCG CGAGTTCTTCGTCACCGCCAGTATCGGCATTGCCCTGAGCCCGCAGGACGGCAACGAACTCAGCCAGTTGATGAAGAATGCTGACACCGCGATGTACCAC GCCAAGGAACGCGGCAAGAACAACTTCCAGTTCTATCAGGCCGACATGAACGCCAGTGCGCTGGAACGCCTGGAGCTGGAAAGCGACCTGCGTCATGCGC TGGAGCAGAACGAATTCGTCCTGTATTACCAGCCACAGTTCAGCGGCGACGGCAAACGTTTGACCGGCGCCGAAGCGCTGCTGCGCTGGCGCCATCCCCG TCGCGGACTGGTGCCGCCGGGGGATTTCATTCCGGTGCTGGAAGAGCTCGGGCTGGTGGTGGACGTTGGCGACTGGGTCATCAGCGAGGCCTGTCGACAG CTGAAAACCTGGCACCAGCAGCGGGTGCGGGTGCCGAAGGTCTCGGTGAACATTTCCGCACGGCAGTTCTCCGACGGCCAGTTGGGCACCCGGATTGCCA CCATCCTGCGGGAAACCGGCCTGCCACCGGCGTGTCTGGAACTGGAACTGACCGAAAGTATCCTGATGCGCGAAGTCAGCGAGGCAATGCAGATTCTTGC CGGACTGAAAAACCTCGGCCTGAGTATCGCAGTCGATGACTTCGGCACCGGTTACTCATCGCTGAACTACCTCAAGCAATTCCCGATCGACGTGCTGAAG ATCGACCGCACTTTCGTTGACGGCCTGCCGTCCGGCGAACAGGACGCACAGATCGCCCGTGCAATTATCGCCATGGCCCACAGCCTGAACCTGGCGGTAA TTGCCGAGGGCGTGGAAACCCACGAGCAACTGGACTTCCTGCGTGAGCATGGCTGCGATGAGGTGCAGGGTTATCTGTTCGGACGGCCGATGCCGGCGGG GCGGTTCGAGGCGCAGTTCTGCAACGACGCGCTGTTCATGTTCGACTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACACGCAATTGTGGCGAGGGAGCTTGCTCCCGCTTGAGTGCGCAGCGCTCACAGGGTTTTGGGGCCGCTGCGCAGCCCGGCGGGAGCAAGCTCCCTCGC CACACAACCACCCGATCACCGCTGATCCCGTCATGAACGCCACTTGTCTGCGACATGATGTCGTTTCATATGTCATCCAAAAGCGGTTGGGTTAGAATGC CCCCCTTTTCTGCCCCCGATCCTTGAGGACCGCCATGTTCAGCCGTGATTTGACTATTGCCAAGTACGACGCCGACCTTTTTGCCGCCATGGAGCAAGAA GCTCAGCGTCAGGAAGAACACATTGAGCTGATCGCTTCGGAAAACTACACCAGCCCAGCGGTGATGGAAGCTCAAGGCTCGGTCCTGACCAACAAGTACG CTGAAGGCTATCCGGGCAAGCGTTACTACGGTGGTTGCGAATACGTCGACGTGGTTGAACAACTGGCCATCGACCGCGCCAAGGAACTGTTCGGCGCCGA
Amino Acid Sequence
>diguanylate phosphodiesterase
MTNVTPPASVSSTPPAPGSPLRGTLKGALATLVLLLLALLFWQLLDQLRETQKNQRQYTIDYTADLAAQVSLNMALNAQIALNLLPIVEQPQTADEQQML LRKLQRSLPDLRSMALLSPSGRIISDSASDSSDADYLTELVRRSRAQAHYFSNADDGSVVHLLLHQASGSSRGYWALRLTPTFFDSLTKQDATALRPLWL VENRLNHQIISREAGLPSAKAGGLTPDDVANTVLTVPLSSSDWQLRGLFDRQRVLEELLPAFIGKCLLGLAFSMLPVIALLNMRRRQRQVHEGRRRYQDI FEGTGVALCVLDLSGLKQMFDKAQIQTSDQLKAWLDQPQQRQQLLAEMRVTEVNQVALQLLDVHSCDDAWQLLIDGQRHPQCAIGQQILDAVLQQQKQLE LEIKLPNSNGRDQHLWMVLRLPSEQHDYKAVILSINDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQTLGYNRTELHQMGEY FWEILLHPEDADYYHRSRQLQRHAGYSQLLQCQLRFRHRDGKWRRFDIREQALARDKHDQVTRIIGVAKDITEQIEASESLRDSEQRYRMLAESISDVIF STDSKLSLNYVSPSVQAVLGYNAEWIFQNGWQSTIANPGQLNGIYTLMDRVSKALDKPEQLALLRSQVQTQLFLFDCLRADGRKIPIELRLVLVWDEHGA FEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYTVSEVLDQLPNMLTVDEQQDAHLRYVLKQLHEHSTWEGEVWMK RRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKPINDSLGHAA GDRMLKDMATRLLACVDDDDTVARMGGDEFTLLLQHRSSRELALNRAIHVAEQILASLVRPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYH AKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVISEACRQ LKTWHQQRVRVPKVSVNISARQFSDGQLGTRIATILRETGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLK IDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPAGRFEAQFCNDALFMFD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site