Pseudomonas fluorescens SF39a, NX10_RS23950 (flhF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00962
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0044781 bacterial-type flagellum organization
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03499
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003924 GTPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd17873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005525 GTP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00962
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 225 395 9.8E-8
Gene3D G3DSA:1.20.120.1380 Flagellar FlhF biosynthesis protein, N domain - - 202 220 2.0E-49
Coils Coil Coil - - 57 77 -
PANTHER PTHR43134 SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA - - 227 413 2.6E-30
SMART SM00962 SRP54_3 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain 226 418 2.1E-51
Pfam PF00448 SRP54-type protein, GTPase domain IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain 228 416 1.2E-46
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 221 405 2.0E-49
FunFam G3DSA:3.40.50.300:FF:000695 Flagellar biosynthesis regulator FlhF - - 221 406 2.7E-61
NCBIfam TIGR03499 JCVI: flagellar biosynthesis protein FlhF IPR020006 Flagellar biosynthesis protein FlhF 1 314 1.8E-73
CDD cd17873 FlhF IPR047040 Flagellar biosynthesis protein FlhF, GTPase domain 227 416 2.74885E-80
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 223 415 4.21E-31

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.