Pseudomonas deceptionensis DSM 26521, TR67_RS07485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas deceptionensis strain DSM 26521 1_1862075_38.8261, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCTCTTGCGGCAGGTAACCGATGTTCAGCTCCGGCATCGGGCGAGCTTCACCGTCAAACTCGGTGTCGACACCTGCCATGATTTTCAGCAGGGTGGAT TTACCCGAACCGTTGAGGCCCAGTACGCCGATTTTGGCGCCCGGGTAAAACGACAGGGAGATGTTTTTCAGGATTTCCCGCTTCGGCGGAACAACTTTGC TCAGCCGATGCATGGTGAAAACGTATTGAGCCATGGAGAACCTAGGGTCAGTGACTGATGAATAAGGTGCGAGCAATGCCCGGATCAGGCCATAGCAGAA AGTCAGGGACTGATCGGGATCAATGCCTGCTCGCAGAAAAAGCATAAGTGTAGACGCCCGAATCTACCTGAATGCGCTGAACAGGGCAAACCAGCGCAGA CCAGAGGACTGGCACTTTGCCACAACCCAAGGCATGCTAAGCGCCCTCTGGGCGTCTTAGAGGGCCTCGCGCCATTGGCGCCGAATTGCAGGATCACAAC
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| DNA Sequence for Gene |
>TR67_RS07485
TTGCCCAATGTCACACCATCCACTCCCGCCAACGCATCCAGCCAATTACTTGGTACGCCTGTGCGCGGGACGTTAAAAAGTGCGTTGGCGGCCCTGGTTC TACTGTTGCTGGCAATGCTCTTCTGGTTATTGATCGAACAGTTCCAGGAAACCCTGCAACAAGAACGCCAGACCAGCATCAATTACAGCGCCGACCTGGC CGATCACATCAGCCTGAGCATGGCGCTCAGGGCCGAGACAGCCCTCAACCTGCTACCCGTCGACCAGTCACCGAAAGACCTGCACCAACAACAGCTACTG GTCACGCAACTACGCCAATCCCTGCCGGCCCTGCAAAGCGCGGCCTTGCTCAGCCCGGCGGGCGAGGTATTGCTCGACAGTACCGGCACCAGCCCCGACG CTGCCTACCTGGCTGACTGGTTCCGCCACACCCCTTCGAGCAGCCGCACCGAAGGCTACTACTACAGCAACAATAATGACGGCAGCGTCGTCTACTTATT GTTACGCCAGCCCAGCGGCGCCATTAATGGTTACTGGCTGCTGCGCATGACCCCGGACCTGCTGCAAAACCTGACACATCAAAGCGCCGGCAGCCGGCCG CAATGGCTGGTCGAAAACACGCAGAGCCGCAACGTGGTCAGCCGTATGGATAAATCCATCACACCGGCTGTCACCCTGACCCCTCGCGATGAAGAGGACA CCGTACTGCTGACCTCCATCAGCCATAGCGACTGGCAACTGCGCGGGTTGTTCGATGACCGCCAGGCGGTTGAGCAGTTGCTGCCGGGGCTGATCGTCAA ATGCCTGCTCGGCTTGCTGTTTTCGATGTTGCCGCTTATCGCACTGTTGAACATGCGCCGCCGCCAGCGTCAGCTGCATGAAGGACGCCGGCGCTATCAC GATATTTTTGAAGGCACCGGCGTCGCGCTGTGCGTGCTCGACATGTCCAGCTTGCCGGGCTTCCTTGAGCGCGAAAAGCTGCACGACAGCGACAGCCTCA AGCTATGGCTGAACGATCGCCCCGAGCATCGTCGCCAGCTGTTTGAACAACTGCGCATCACCGAAGTGAACCAGGTGGCCATGCAACTGCTGTCGGTCGA ATCAGGGGACGGCGCCTGGCAAAAGCTGATCAATGGTTGCCCGCAAACCATCTCGGCCATTGGGTATCGGATCGTCGAAGCCGTACTCGATCAACAGCAG CAGCTCGAACTGGAAATAAGGCTGACCAATGCCGATGGCCAGGATCAGCATTTATGGCTGGTACTGCGCCTGCCTGTGGACCGTCAGGAGTATCACGCCG TCATCCTGAGCATCAGCGACATCACCAGCCGCAAGCTGATCGAGTTGTCCCTGCAGGAACGCGAAAGCTTTTGGTCCGATGTGGTGCGCACCGTACCCGA CCACCTCTATGTGCAAAATGTAATTACCCAACAGATCATCTTCAGCAACCATCACCTTGGGCAAACCCTGGGCTACAGCGACGCCGAGCTGCAGCAAATG GGCGCTTACTTCTGGGAGCTGCTGCTGCACCCCGAAGACGCCGAGCGCTATCACCACTTGCGCCAGCAGCAACGGCTCGATGGCTACAAGGTCCTGATGC AATGCCAATTGCGCTTTCGCCACCACCACGGCAACTGGCGCTGCTTCGAGATCCGCGAGCAGGCCTTCGCCCGTGACACCGGCGATCAAGTCACGCGCAT TGTCGGGGTGGCCAAAGACATCACCGACCAAATCGAAGCCAGCGAATCGTTGCGCGACAGCGAACAGCGTTACCGGATGCTGGCCGAAAGCATCAGCGAC ATTATTTTCTCCACCGACAGCACGTTGCAGCTGAACTACCTCAGCCCGTCAATACAGACAGTACTGGGCTACGAAGCGCAATGGGTGTTCAACAACGGCT GGCAATCGATTATCGCCACGCCACAGCAACTGACCGGCATTTACGGCCTGATCGAACGCGTCAGTGCTGCCCTGGACAAACCCCAGCAACTATCAGCCCT GCGTTCCCAGGTGCAAAGTCAGCTGTTCCTGCTCGATTGCCTGCGCGCAGACGGCCATAAAGTCCCCATCGAGTTGCGCCTGGTGCTGGTATGGGATGAG AACGATGCCTTCGAAGGCATTTTGGGCGTCGGCCGTGATATCAGTCAGCAGCGCCGGGCCGAAAAAGACCTGCGCATGGCCGCGACGGTATTCGAACACT CCACCTCGGCCATCCTGATTACCGACCCCGCAGGCTATATCGTGCAAGCCAACGAAGCCTTCAGCCGGGTCAGCGGTTACGCAGTGGCCCAGGTGCTCGA CCAATTGCCGAGCATGCTGACGGTCGACCCCCAGCAGAGTGCGCAACTTGCCTATGTGCTCAAGCAACTGCATCTGCACGGCACCTGGGAAGGTGAAGTC TGGCTCAAGCGCCTCAACGGCGAACACTACCCGGCCTGGGTCGGCATCAATGCGGTGCTCGATGACGAGGGCGATCTGGCCAGCTATGTGTGTTTTTTCA GTGACATCAGCGAGCGCAAGGCCAGCGAACAGCGGATTCACCGCCTGGCCTATTACGACGCTCTGACCCACCTGCCCAACCGCACCCTCTTCCAGGACCG TCTGCACACGGCACTGCAACAGGCCGAGCGCAACAAGTCGTGGGTGGTGCTGATGTTCCTCGACCTCGACCGTTTCAAGCCCATCAACGACTCACTGGGC CACGCGGCAGGCGACCGCATGCTCAAGGACATGGCTATTCGCCTGCTTGCCTGCGTCAGCGACGACGATACCGTCGCACGCATGGGTGGCGACGAGTTCA CCCTCCTCTTGCAGCCTCGGGCATCACGCCAAATGGCCTTGAACCGGGCTATCAGTGTGGCCGAGCAAATCCTCGCCAGCCTGGTGAAACCCTTTGTGCT CGAAAGCCGCGAGTTTTTCGTAACGGCCAGCATTGGCATCGCCCTGAGCCCGCAAGACGGCAACGAACTCAGCCAACTGATGAAAAACGCCGACACCGCG ATGTATCACGCCAAGGAGCGCGGCAAAAACAACTTCCAGTTCTATCAGGCGGACATGAACGCCAGCGCCCTGGAGCGCCTGGAGCTCGAAAGCGACCTGC GCCATGCGCTGGAACAGAAAGAATTCATCCTGTACTACCAACCGCAATTCAGCGGCGACGGTAAACGCCTGACCGGAGTCGAGGCGCTGTTGCGCTGGAA CCATCCGAGACGCGGCCTGGTACCGCCCGGCGACTTTATTCCAGTACTCGAAGAGCTGGGCCTGGTGGTGGAAGTGGGCGACTGGGTGCTGGCAGAAGCC TGCCGCCAGCTCAAGCTTTGGCACCAGGTCAAAGTGCGCGTGCCCAAAGTCTCGGTCAACATCTCGGCGCGCCAGTTCTCCGATGGCCAACTGGGCACGC GCATCGCCAATATCCTCAAGAAAACCGGCCTGTCGCCTGCCTGCCTGGAGCTTGAGCTGACCGAAAGCATCCTGATGCGCGAAGTCAGCGAGGCCCTGCA CATTCTGGCCAGCCTGAAAAACCTCGGCCTGAGTATCGCCGTAGACGACTTTGGCACCGGTTACTCGTCGCTCAACTACCTCAAGCAATTCCCCATCGAC GTGCTGAAAATCGACCGCACCTTTGTCGACGGCCTGCCCTCAGGTGAACAGGACGCCCAGATAGCCCGGGCGATCATTGCGATGGCCCACAGCCTGAACC TTGCCGTTATCGCCGAAGGTGTAGAGACCCACGAACAACTGGATTTCTTGCGCGAGCACGGCTGCGATGAGGTGCAAGGCTACCTCTTCGGGCGGCCGAT GCCCGCTCATTTGCTGGTCAAGCAGCTGAAAGCAGCGAGTGATGAGCTGCAAAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACTTGCAGTGCGATCAAGTGCGCCGTGAATCGCATTCATATGCCAGATAAAACCCATTGAGTTAGAATGCCCTCCTTTTCTGCCCCCGATCCTTGAGGA CCGCCATGTTCAGCCGTGATTTGACACTTGCCAAGTTCGACGCCGACCTTTTTGCCGCCATGGAGCAAGAAGCTCAGCGCCAGGAAGAACATATTGAGCT GATCGCTTCGGAAAACTACACCAGCCCAGCGGTCATGGAAGCTCAAGGCTCGGTGCTGACCAACAAATACGCCGAAGGTTACCCGGGCAAGCGCTACTAC GGCGGCTGTGAATACGTCGACGTAGTTGAGCAACTGGCTATCGACCGTGCAAAAGAACTGTTCGGCGCCGATTACGCCAACGTTCAGCCGCACGCCGGCT CCCAGGCCAACAGCGCTGTGTACCTGGCCCTTCTGTCGGCTGGCGACACCATCCTGGGCATGAGCCTGGCCCACGGCGGTCACTTGACCCACGGCGCCAG
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MPNVTPSTPANASSQLLGTPVRGTLKSALAALVLLLLAMLFWLLIEQFQETLQQERQTSINYSADLADHISLSMALRAETALNLLPVDQSPKDLHQQQLL VTQLRQSLPALQSAALLSPAGEVLLDSTGTSPDAAYLADWFRHTPSSSRTEGYYYSNNNDGSVVYLLLRQPSGAINGYWLLRMTPDLLQNLTHQSAGSRP QWLVENTQSRNVVSRMDKSITPAVTLTPRDEEDTVLLTSISHSDWQLRGLFDDRQAVEQLLPGLIVKCLLGLLFSMLPLIALLNMRRRQRQLHEGRRRYH DIFEGTGVALCVLDMSSLPGFLEREKLHDSDSLKLWLNDRPEHRRQLFEQLRITEVNQVAMQLLSVESGDGAWQKLINGCPQTISAIGYRIVEAVLDQQQ QLELEIRLTNADGQDQHLWLVLRLPVDRQEYHAVILSISDITSRKLIELSLQERESFWSDVVRTVPDHLYVQNVITQQIIFSNHHLGQTLGYSDAELQQM GAYFWELLLHPEDAERYHHLRQQQRLDGYKVLMQCQLRFRHHHGNWRCFEIREQAFARDTGDQVTRIVGVAKDITDQIEASESLRDSEQRYRMLAESISD IIFSTDSTLQLNYLSPSIQTVLGYEAQWVFNNGWQSIIATPQQLTGIYGLIERVSAALDKPQQLSALRSQVQSQLFLLDCLRADGHKVPIELRLVLVWDE NDAFEGILGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVAQVLDQLPSMLTVDPQQSAQLAYVLKQLHLHGTWEGEV WLKRLNGEHYPAWVGINAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNKSWVVLMFLDLDRFKPINDSLG HAAGDRMLKDMAIRLLACVSDDDTVARMGGDEFTLLLQPRASRQMALNRAISVAEQILASLVKPFVLESREFFVTASIGIALSPQDGNELSQLMKNADTA MYHAKERGKNNFQFYQADMNASALERLELESDLRHALEQKEFILYYQPQFSGDGKRLTGVEALLRWNHPRRGLVPPGDFIPVLEELGLVVEVGDWVLAEA CRQLKLWHQVKVRVPKVSVNISARQFSDGQLGTRIANILKKTGLSPACLELELTESILMREVSEALHILASLKNLGLSIAVDDFGTGYSSLNYLKQFPID VLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPAHLLVKQLKAASDELQN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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