Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCTGGATGTCGCGGGTCAGCTCCGGGGTCAGCTTGCCCTGTTCCTGGATGCTGGCGAGGATGCTCGCGCGGCGCTCGTCGAGTTCGCGCAGGTAGCGCA GGCGCTCGTCGAGGTGGCGCAGTTGGGTGTCGTCCAAGCTGCCGGTGACCTCTTTGCGGTAACGGGCGATGAAGGGCACCGTCGAGCCTTCGTCCAACAA GGCTACGGCCGCCGCGACCTGCTGCGGGCGAACGCCCAGTTCCTCGGCGATACGGCTGTTGATGCTGTCCATGAGAACTACCTGACAATGGGTGAATGCG TGAGGCCGCGGGCGGGCGGCAAGCCCGGCGCTGCTCGGTCAAGGCCGGGGATTATACGCATCGCATCCGGCTTGCGGTGATGGCCCCCGGCCACCTGCGC AGGTGGGAAGTGGCGCCCCGGGAAAAATCTGCTAACAATGCACACGGCACGGGCTACAGCGGCTACGCCATAATGCCGGCCGACATCAGAGGAGCTATTC
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DNA Sequence for Gene |
>LK03_RS04990
ATGAGTGGCACTGCAAACAACGCTGAAGGCGAAAAGATTCTCATCGTCGATGACGATCCGGGGCTGAGCAACCTGCTTGAGCGTTTCTTCACCAGCAAGG GCTACCGTGCCCGCGCCGTGCCCAATGTCGAACAGATGGATCGCCTGCTGGCGCGCGAGGTGTTCAACCTGGTCGTGCTCGATCTCATGCTCCCTGGCGA AGATGGACTGTCGGCCTGCCGTCGGCTGCGCGCCGCGAACAACCAGATCCCTATCATCATGCTCACCGCCAAGGGCGATGAGCTCAGCCGCATCAAGGGC CTGGAGCTGGGCGCGGACGATTACCTGGCCAAGCCCTTCAACCCCGACGAACTGGTGGCGCGGGTCAAGGCCGTGCTGCGCCGGCAATCGCCGAGCGTTC CCGGCGCCCCGGGCAGCGAAGACGAAACCGTCACCTTTGGCGACTACGAGTTGTCGCTGGCGACCCGTGAGCTCAAGCGCGGCAACGAGGTGCACATGCT CACCACCGGCGAGTTCGCCGTGCTCAAGGCACTGGTCATGCATGCCCGCGAGCCGATGACCCGCGACAAGCTGATGAACCTGGCCCGGGGTCGCGAGTGG GATGCCTTGGAGCGCTCCATCGACGTCCAGATTTCCCGCCTGCGGCGCATGATCGAGCCCGACCCTTCCAAGCCGCGCTACATCCAGACGGTGTGGGGCG TCGGCTACGTGTTCGTACCGGACGGCAACGCCAGTAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCCCCGTTCGCGGGCGCTCCCTGATGCAGCAGGGCGATCCTCGGTGATCGCCCTGTTTGCGTTCGCGTTGGGCCAGCGGCATCGCTGCGCCCCTGTCAT TCAGCAGTTGGTCCGATGAAAACGCCTCTCTGGTTCCCGCAAAGCTTCTTCTCTCGCACCCTCTGGCTGGTGCTGATCGTCGTGCTGTTCTCCAAGGCGT TGACCCTGGTCTACCTGCTGATGAACGAGGATGTGCTGGTCGACCGTCAGTACAGCCACGGTGTGGCCCTGACGCTACGCGCGTACTGGGCCGCCGATGA AGAAAACCGTGATCAGATCGCCGAGGCAGCCGGGCTGATCCGCGTCACCGGCGCCGGCGTGCCGGAAGGCGAGCAGCACTGGCCCTACAGCGAAATCTAT CAACGCCAGATGCAGGCCGAGCTGGGCGAAGACACCGAAGTGCGTCTGCGTATCCATGCGCCACCGGCGCTGTGGGTCAACGCGCCAAGCCTGGGGCCGG
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Amino Acid Sequence |
>chemotaxis protein CheY
MSGTANNAEGEKILIVDDDPGLSNLLERFFTSKGYRARAVPNVEQMDRLLAREVFNLVVLDLMLPGEDGLSACRRLRAANNQIPIIMLTAKGDELSRIKG LELGADDYLAKPFNPDELVARVKAVLRRQSPSVPGAPGSEDETVTFGDYELSLATRELKRGNEVHMLTTGEFAVLKALVMHAREPMTRDKLMNLARGREW DALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVPDGNASK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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