Strain | Pseudomonas cremoricolorata strain ND07, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCAGCAGGCGCCCGACACCCCACGCCTGGACCTCAAGACCGCCCTGCGCCCGCAGCTCGACGCCCTGCAGCACCAATTGCTGATCGACCTGCAACGCTT CGACCGCGAGCGCCCTGCCGATTGCGCGCGCGCGCTGGCCAATGCCATTGTCGAGCGTGCCCGCGACCCCTTGCATGAACTGGCACTGCAACGGGCCACA GGACGTCTTTGCGAAGCCCTTTGAGCGCAATGCTCTATATTGGTGCATCTGCAGGTTGCGCGAGGGATCGCGCAACCCACTTTGGTACGCCGCCGCAGCA GCAATGGGCCTGGATCGCGCAAACGGGGGCTGTGATCCACTGATTTTGCTTCTTTTCAGAGCCTTGGTTTGTTTCTTGCATTTTCAGAGCATCACCCGAT CGCATCACGCCGAAACCGGCCGCCGCTTTTCAGGGCACCCATCGAGTCCACTTTGCGCTCAGCGCGCCGTCATGCGGCATACATGAGGTCACCCCAGATC
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DNA Sequence for Gene |
>LK03_RS03820
ATGACCATCAGCGATGCACAGCACAGGCTGCTGCTGGACAACCTGACCACCGCGACACTGCTGCTCAATGCCGAGCTGCGCCTGGAGTACATGAACCCGG CAGCCGAGATGCTGTTGGCCGTCAGTGGTCAGCGCAGCCACGGCCAGTTCATCAGCGAACTGTTCACCGAATCGGTCGAGGCGCTTGGCTCGCTGCGCCA GGCCGTGCAACAGGCCCACCCGTTCACCAAGCGTGAAGCCCAGCTCACCTCGCTGGGCGGTCAGAGCATCACCGTCGACTATGCCGTAACGCCGATCCTG CACCAGGGCGCCACCCTTCTGCTGCTGGAGGTTCACCCCCGTGATCGTCTGCTGCGCATCACCAAGGAAGAGGCGCAACTAAGCAAGCAGGAAACCACCA AGATGCTGGTGCGTGGCCTGGCCCACGAAATCAAGAACCCGCTGGGCGGCATTCGTGGCGCCGCGCAACTGCTGGCCCGCGAGCTGCCCGAAGACGGTCT GCGCGACTACACCAACGTGATCATCGAAGAGGCCGACCGCCTGCGCAACCTGGTCGACCGCATGCTGGGCTCGAACAAGCTGCCCTCGCTGGCCATGACC AACATCCACGAGGTGCTGGAGCGGGTCTGCAGCCTGGTCGAGGCCGAAAGCCAGGGCGGCATCACGTTGGTGCGCGACTACGACCCGAGCCTGCCCGACG TGCTGATCGACCGCGAGCAGATGATCCAGGCGGTGCTCAACATCGTGCGCAACGCCATGCAGGCGATCGGCGCGCAAAACGCCCTGCGCCTGGGACGCAT CAGCCTGCGCAGCCGCGCCGTGCGCCAGTTCACCATCGGCCACATCCGCCACCGCCTGGTGGCACGGGTCGAGATCAGCGACAACGGCCCCGGCATCCCG GCTGAACTGCAAGACACGCTGTTCTATCCGATGGTCAGCGGGCGCCCCGATGGCACCGGTCTGGGCCTTGCCATCACCCAGAACATCATCAGCCAGCACC AAGGGCTGATCGAGTGTGAGAGCCACCCCGGTCACACCACCTTTTCGATATTCCTGCCGCTGGAACAAGGAGCCCCCGTCTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGAAGTGAAACCGTCTGGATCGTCGACGATGATCGCTCCATCCGCTGGGTGCTGGAAAAAGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGA CAGCGCCGAGGGCGTGATGGGCCGCCTGGCGCGCCAGCAACCGGACGTGATCATTTCCGATATCCGCATGCCGGGCACCAGCGGCCTCGACCTGCTGGCG CAGATCCGCGAGCAGCACCCGCGCCTGCCGGTGATCATCATGACCGCCCATTCCGACCTCGACAGCGCGGTCGCCTCGTACCAGGGCGGCGCTTTCGAGT ACCTGCCCAAGCCGTTCGACGTCGATGAAGCGGTTGCCCTGGTCCAGCGCGCCAACCAGCACGCTCAGGAACAGCAGGGCCTGGCCATACCCCAGGTGCA GGCACGCACCCCGGAGATCATCGGCGAGGCGCCGGCGATGCAGGAGGTGTTCCGCGCCATTGGCCGCCTCAGCCACTCCAACATCACGGTGTTGATCAAC
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Amino Acid Sequence |
>histidine kinase
MTISDAQHRLLLDNLTTATLLLNAELRLEYMNPAAEMLLAVSGQRSHGQFISELFTESVEALGSLRQAVQQAHPFTKREAQLTSLGGQSITVDYAVTPIL HQGATLLLLEVHPRDRLLRITKEEAQLSKQETTKMLVRGLAHEIKNPLGGIRGAAQLLARELPEDGLRDYTNVIIEEADRLRNLVDRMLGSNKLPSLAMT NIHEVLERVCSLVEAESQGGITLVRDYDPSLPDVLIDREQMIQAVLNIVRNAMQAIGAQNALRLGRISLRSRAVRQFTIGHIRHRLVARVEISDNGPGIP AELQDTLFYPMVSGRPDGTGLGLAITQNIISQHQGLIECESHPGHTTFSIFLPLEQGAPVS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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