Pseudomonas cremoricolorata ND07, LK03_RS03820

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psw02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 237 356 5.4E-15
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 132 197 3.8E-15
Gene3D G3DSA:3.30.450.20 PAS domain - - 4 115 8.4E-20
FunFam G3DSA:1.10.287.130:FF:000005 Nitrogen regulation histidine kinase - - 118 193 5.5E-43
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 288 302 1.0E-11
CDD cd16918 HATPase_Glnl-NtrB-like - - 241 353 1.12803E-58
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 136 189 4.0E-14
PANTHER PTHR43065 SENSOR HISTIDINE KINASE - - 9 358 1.1E-47
SMART SM00091 pas_2 IPR000014 PAS domain 6 74 8.0E-5
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 5 105 2.97E-8
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 196 355 8.5E-40
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 317 335 1.0E-11
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 200 354 6.02E-35
FunFam G3DSA:3.30.565.10:FF:000008 Nitrogen regulation histidine kinase - - 195 356 4.8E-80
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 340 353 1.0E-11
Gene3D G3DSA:1.10.287.130 - - - 118 193 1.3E-13
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 236 356 4.3E-28
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 136 189 9.04595E-12
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 127 194 4.51E-13
Pfam PF08448 PAS fold IPR013656 PAS fold-4 12 108 6.4E-5
CDD cd00130 PAS IPR000014 PAS domain 15 115 7.04957E-4

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.