Pseudomonas cichorii JBC1, BH81_RS25480

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00563	EAL domain	IPR001633	EAL domain	582	816	2.8E-76
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	405	563	1.89594E-50
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	576	831	4.7E-95
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	284	399	3.0E-17
Pfam	PF13426	PAS domain	IPR000014	PAS domain	290	391	2.1E-15
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	405	560	2.5E-40
CDD	cd01948	EAL	IPR001633	EAL domain	582	820	5.31328E-117
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	575	829	3.0E-104
CDD	cd00130	PAS	IPR000014	PAS domain	289	390	3.69078E-11
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	582	824	1.03E-91
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	284	391	2.42E-25
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	253	826	0.0
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	393	565	1.5E-51
SMART	SM00091	pas_2	IPR000014	PAS domain	279	345	1.7E-8
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	405	573	4.7E-48
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	280	404	1.7E-29
SMART	SM00052	duf2_2	IPR001633	EAL domain	575	821	4.1E-119
SMART	SM00086	pac_2	IPR001610	PAC motif	351	393	0.0069
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	409	567	5.73E-42
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	403	563	2.7E-31

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.