Pseudomonas cichorii JBC1, BH81_RS21815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cichorii JBC1, complete genome. [Details]
DNA Sequence Upstream of Gene
TTGCTCAGCCGATGCATGGTAAAGACGTATTGAGCCATGGAATGAAAACCTAGCGTCTGTGAGGGTGACTGATTAAAGCGCGAGCTTTTATTTGTCTCTG CTACTTGCCGCAGTGCCATTCAAAGCCTTGAATGAAACAGACAGAGAACGGACTTCTGCATCCGGGCAAATATAAAGCTGGATCGATGTTTGCAAGCAGT GGATTCACTCTTGCAGGAGTCGGGTTACAACGCGCATCGGGCAAAGCTACCCGAATGCGGCCTGTAGGGCAAACGATCCGGCCCCACAGGGCTGGCACTT CGCTACAACTCAGGGCATGCTAGCCGCCCTTTGGGCGTCGGGCTTTAATTGCATAACGCACTCGCTGCTTCAGTCCAGTAGTCAGGAACAACGATTTGCC TACACCAACGCCCTCCACGCCATCAGAAACAGCCAAAAGCACAACCGTTGTGCCTTTGCGTAGTTCCTTGAAAGGGCTACTGGCAGCGCTGGTTCTACTG
DNA Sequence for Gene
>BH81_RS21815
ATGCTTGCACTGCTGTTGTGGCAACTGCTCGAGCAGTTTCACCAGACACAGGAGCGCCAGCGTCAGCGCAGTCTCGACTACAGTACGCAACTCGCAGACC GCTTGAGCCTCAACATGGCCCTGAGCGCGCAGATCACCATGAACCTGCTGGATGAAGGAACGCCATCCAGAAGCGAAATCGCTCCTCAGAAACATCCCCT GCAAAGGCTGCGAGAAACCGTACCGTCCTTGCGCAGCGTGGCATGGCTCAGTCCTCAGGGTGATGTGATCCGCGACAGCGCCGAAACCACACTGGACGGT GCATTTCTCAAGAGCGCGCTCCAGCAGGCAGTGGGTCGGCCTTATTACTACACCAGTTCCGAAGATGGCCTGCAGATCTACATGTTCGTGCATCAGGCCG ACGGCCTCGGCGGCGCCTACTGGGCCGTACGCATGGCGCCGGATGCCCTCAAGGCACTGATACAGCAACCCAGCCAGGACTTTCAGCATCTGTGGCGGCT CGAAAGCCGCCTGACCCAGCGGGTCATCCTGCGCGACGCATCGATGCAGACCGATTCCGGGCAGGCAGAAAGCGTGCTGCTGCAACCCTTGAGCAACAGC GACTGGCAACTGCACGGCCTGTTCGATGCCCACAAGGCACGTCAGGAACTGATTGCGCCCCTGATCGTGAAATGCGTGGTCGGCCTGCTGTTTTCACTCC TGCCCCTGGCCGCCATTCTCAGCATGCGTCGCCGCCAGCGCCAACTGCTGAAAAGTCGCCGCCGTTATCAGGACATTTTCGAAGGCGCAGGCGTTGCCAT CTGCGTACTGGACATGTCCGACCTGCCTGAGCAGCTCGAAACCTTCCAGATCCGAACCACAGAAGACTTCGATCACTTTATCGAGACACAACCGGTGCTG CTGAAGCGACTGCTGCAGCAGATACGCATCACAGAGGTCAATCAGGTTGCCCTGAGCCTGTTGAATATCAAGTGCGGCGATGAAGCCTGGCAGCAACTGA TAGAAGGCGAATCGCGCAAGCGGCCCGGCATCGGCACCCAGGTGATTCAGGCGGTTCTGAACCGACAGCAACGACTCGAACTGGAAATCCGCCTCACCCG TGAGTCCGGCCAGGACCAGCATCTATGGCTGGTATTGCGCTTGCCTGAAACCCGGTCCGACCATGACGCTGTCATCCTGAGCATCGGCGACATCACCAGC CGCAAGCAGATCGAACTGTCATTGCAGGAGCGCGAGCGCTTCTGGTCGGATGTGGTCCGCACCGTGCCCGATCACCTGTATGTCCAGGACGTGCTCAGCC AGCGCATGATCTACAGCAACCACCATCTGGGGCAGACGCTGGGCTACAGCAAGAGCGAACTGCACGCCATGGGCGAGTTTTTCTGGGAAATCCTGCTGCA CCCCGAGGATGCCCAGAGCTATCAGGACATGCGCCTGCGCCAACGCCATCACGGGCACAACGAACTGCTGCAATGTGCCCTGCGCTTTCGTCACAAGGAC ACTACCTGGCGTTGCTTCGATATCCGCGAACAAGCCCTGACCCGGGACAAGGAAGATCTGGTCACCCGCATCATCGGCGTCGCCAAGGACATCACACGCC AGGTCGAGGCCAGTCAGTCCTTGCGCGACAGCGAGCAGCGCTACCGGATGCTCGCCGAAAGCATCAGTGATGTGATCTTCTCTACCGACAGGCTGCTGGA AGTCAACTATGTCAGCCCCTCGGTGCAAAGCGTTCTGGGCTACGAAGCCGACTGGGTTATCCAGAACGGCTGGGGCTCCACCGTTGCCAACCCGCAGCAG CTATCAGGCTTCTACAACCTGATAGCGCGCATCAAGCGGGTGCTCGACAACCCTCAGGAACTGGCGAAGCTGCGCAGCGCTGTTCCCACCCAGCTGTACC TGTTCGATTGCCTGCGTGCCGATGGCCGCAAGATCCCGGTAGAGCTGCGACTGGTTCTGGTCTGGGATGAGCACGGAACATTCGAAGGCATACTGGGCGT GGGCCGCGATATCAGCACCCAGCGTCGCGCCGAAAAAGACCTGCGAATGGCAGCTACGGTTTTCGAGCACTCGACGTCCGCGATCCTGATTACCGACCCG GCGGGTTATATCGTCCAGGCCAACGACGCCTTCACTCGGGTCAGCGGCTATGACGTGTCACAAGTGCTCGATCAATTACCGAACATGCTTACCGTGGATC GAGAGCAGGAAGCCCACCTGCGCTACATCCTCAAACAACTGAACCAGCGCGGCACCTGGGAAGGCGAAGTCTGGCTCAAGCGTCGCAATGGCGAGCATTA CCCGGCCTGGGTCGGCATCACGGCCGTGGTGGATGATGAAGGCGACCTGGCCAGCTATGTGTGCTTCTTCAGCGATATCAGCGAGCGCAAGGCCAGCGAA CAGCGCATTCACCGCCTGGCCTATTACGACGCCCTGACCCACCTGCCCAACCGCACACTGTTCCAGGACCGCCTGCATTCGGCCCTGCAACATGCAGAAA GACAGCAGGCCTGGGTGGTTCTCATGTTCCTGGACCTGGATCGCTTCAAGCCGATCAACGACTCCCTGGGCCACGCCGCCGGCGACCGCATGCTCAAGGA AATGGCCACCCGGCTGCTGGCCTGTGTCGCCGACGATGACACGGTCGCGCGCATGGGCGGCGATGAGTTCACCCTGCTGCTGCAACCGGGAGCCACCCGC GAGATCGCGCTCAATCGTGCGATCCACGTGGCCGAGCAGATCCTCAACAGCCTGATCACGCCTTTCGTGCTGGAAGGCCGTGAGTTCTTCGTGACCGCCA GTATCGGCATCGCCCTGAGCCCGCAGGACGGCAACGAACTGAGCCAGTTGATGAAGAACGCCGACACCGCGATGTACCACGCCAAGGAGCGCGGCAAGAA CAACTTCCAGTTCTACCAGACCGACATGAACGCCACCGCCCTGGAACGTCTGGAGCTGGAAAGCGACCTGCGCCATGCCCTGGAGCAGCAAGAGTTCACG ATCTACTACCAGCCTCAGTTCAGCGGCGACGGCAAACGCCTGACCGGCGCCGAAGCCCTGCTGCGCTGGCGGCATCCACGCCGCGGCCTGGTGCCGCCCA GCGAGTTCATCCCGGTTCTGGAAGAACTCGGTCTGGTGGTGGAAGTCGGGGACTGGGTACTGGCCGAAGCCTGTCGTCAGCTCAAGAGCTGGCATCAGGC AAAAGTGCGGGTCCCCAAGGTATCGGTGAATATTTCCGCAAGACAGTTTTCGGACGGCCAGCTCGGCAAGCGTATCGCCCGGATGCTGGGCGAAACCGGT CTGCCACCGGCTTGCCTGGAGCTGGAACTGACCGAAAGTATCCTGATGCGCGAAGTCAGCGAAGCCATGCAAATGCTCGACGGCCTGAAGAATCTTGGCC TGAGCATCGCGGTCGATGACTTCGGCACCGGCTATTCATCGTTGAACTACCTCAAGCAGTTCCCGATTGACGTACTGAAAATCGACCGCACCTTCGTCGA TGGCCTGCCATCGGGCGAACAGGACGCACAGATTGCCCGCGCCATCATCGCCATGGCTCACAGCCTGAACCTTGCGGTCATCGCCGAAGGCGTCGAAACC CACGAACAGCTGGAGTTCCTACGCGAACACGGCTGCGACGAAGTCCAGGGCTACCTCTTCGGCCGCCCGATGCCGGCTTCGCAGTTCGAGGCGCAGTTCA GCAATGATGCGTTGTTCATGTTCGACTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGAACAGAAACAAAGCGGCAAGCTGCAAGTTGGGAGTTTCAAGCAAAAGCAGATTTTTTCCGAACGCTACGACCCCGCTCTTGCTTGTAGCTTGCCGC TTGTAACTTGCAGCTTCCCCTCCTACTTGCCTTCTGCTCATCCACCAAATGAGCCCCTTTCATATGCCAGATAAAACGCGATGGGGTAGAATGCTCCCCT TTTCCGCTCCAACCCCTCGAGGACTGCCATGTTCAGCCGTGATTTGACTCTCGCGAAGTACGACTCCGATCTTTTTGCCGCCATGGAGCAAGAAGCCCTG CGCCAGGAAGAGCACATCGAACTGATTGCCTCGGAAAACTACACCAGCCCGGCTGTCATGGAGGCTCAGGGCTCGGTCCTGACCAACAAGTACGCCGAAG GCTATCCGGGCAAGCGCTACTACGGTGGCTGCGAGTACGTCGACGTCGTTGAACAACTGGCCATCGACCGCGCCAAGGAACTGTTCGGCGCTGATTACGC
Amino Acid Sequence
>diguanylate phosphodiesterase
MLALLLWQLLEQFHQTQERQRQRSLDYSTQLADRLSLNMALSAQITMNLLDEGTPSRSEIAPQKHPLQRLRETVPSLRSVAWLSPQGDVIRDSAETTLDG AFLKSALQQAVGRPYYYTSSEDGLQIYMFVHQADGLGGAYWAVRMAPDALKALIQQPSQDFQHLWRLESRLTQRVILRDASMQTDSGQAESVLLQPLSNS DWQLHGLFDAHKARQELIAPLIVKCVVGLLFSLLPLAAILSMRRRQRQLLKSRRRYQDIFEGAGVAICVLDMSDLPEQLETFQIRTTEDFDHFIETQPVL LKRLLQQIRITEVNQVALSLLNIKCGDEAWQQLIEGESRKRPGIGTQVIQAVLNRQQRLELEIRLTRESGQDQHLWLVLRLPETRSDHDAVILSIGDITS RKQIELSLQERERFWSDVVRTVPDHLYVQDVLSQRMIYSNHHLGQTLGYSKSELHAMGEFFWEILLHPEDAQSYQDMRLRQRHHGHNELLQCALRFRHKD TTWRCFDIREQALTRDKEDLVTRIIGVAKDITRQVEASQSLRDSEQRYRMLAESISDVIFSTDRLLEVNYVSPSVQSVLGYEADWVIQNGWGSTVANPQQ LSGFYNLIARIKRVLDNPQELAKLRSAVPTQLYLFDCLRADGRKIPVELRLVLVWDEHGTFEGILGVGRDISTQRRAEKDLRMAATVFEHSTSAILITDP AGYIVQANDAFTRVSGYDVSQVLDQLPNMLTVDREQEAHLRYILKQLNQRGTWEGEVWLKRRNGEHYPAWVGITAVVDDEGDLASYVCFFSDISERKASE QRIHRLAYYDALTHLPNRTLFQDRLHSALQHAERQQAWVVLMFLDLDRFKPINDSLGHAAGDRMLKEMATRLLACVADDDTVARMGGDEFTLLLQPGATR EIALNRAIHVAEQILNSLITPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQTDMNATALERLELESDLRHALEQQEFT IYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPSEFIPVLEELGLVVEVGDWVLAEACRQLKSWHQAKVRVPKVSVNISARQFSDGQLGKRIARMLGETG LPPACLELELTESILMREVSEAMQMLDGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVET HEQLEFLREHGCDEVQGYLFGRPMPASQFEAQFSNDALFMFD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site