Pseudomonas cichorii JBC1, BH81_RS20170
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cichorii JBC1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCCCCTTCCAAGCAAGTTTCCTGCAGGCAGTGATTAGACCTGCACGAAAAACGCAGCTCGACCAGGGTCGGCTGCGTGAATAGTCTTGTCGCCGGTCCCA CTGTCGATGATCGATCGACTTCGTGCAGACCGGCGCTGTTCCTTTATAGGCAACCCGCTATTGAGCATAGGCCCGATTAAAAGTTCCCATGCTCATTCAC AGGCGCAAGACACCTTTCTCCCGGAATCAGGCCAATGCTGCAGCCCTGATAAGCGACTCAATGGAAAACGGTATGCATGACATCAGGGACTGGCGCACAA TCCTGTGCCGCAATAGTCTCAGATTGCCATAAAGGCGAGGCTATTGTGCCGATACCCCCTTACTTATACTAGGGCCTGTTGCCGTTTCAGCACGAACTCC ATGACTGCGCAAAACAAAGCATGTCCACCCGATCCGTGGCATAGCGCAAAACCATATTGAAATCACAGAACCTGATGGCCGCCAAAGGCAGAATTCATAG
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| DNA Sequence for Gene |
>BH81_RS20170
ATGAGTCAACATTTTCAGCACGATGTACTGGTGATTGGCAGCGGCGCGGCAGGGTTGAGTCTGGCGCTGACCCTTCCCGGACATTTGCGCATTGCCGTCC TGAGCAAGGGCGACCTGTCCAATGGCTCTACATTCTGGGCCCAGGGCGGCGTCGCGGCCGTGCTCGACGACACCGACACCGTACAATCCCATGTCGAAGA CACCCTCAATGCCGGCGGCGGCCTGTGCAATGAAGAAGCGGTGCGCTTCACGGTCGAACACAGCCGTGAATCCATCCAGTGGCTGATCGACCAGGGCGTA CCCTTTACCCGTGGCGACCACTCGGACACCGAAGAAAGCGGTTTTGAATTCCACCTGACCCGCGAAGGCGGCCACAGCCATCGCCGGATCATCCACGCGG CCGACGCGACCGGTGCCGCCATTTTCAAGACCCTGTTCGAACAGGCCAGCAAGCGCCCGAATATCGAGCTATTGGATCAGCGCGCCGCCATCGACCTGAT CACCGAGCGACGCCTGGGCCTGACAGGCCAGCGCTGCCTGGGCGCCTACGTACTCAACCGCAAGACCGGAGAAGTCGACACCTACGGCGCGCGCTTCACC ATTCTGGCCTCCGGCGGCGCAGCAAAGGTTTACCTCTATACCAGCAACCCGGACGGCGCCTGTGGCGACGGCATTGCCATGGCATGGCGTTCCGGCTGCC GGGTCGCCAATCTGGAGTTCAACCAGTTCCACCCGACCTGCCTGTATCACCCGCAGGCCAAGAGCTTTCTGATTACCGAAGCATTACGTGGCGAAGGCGC ATATCTCAAGCTGCCCAACGGCGAGCGCTTCATGCCCCGCTTCGATGAGCGCGCCGAACTGGCCCCACGGGACATCGTTGCCCGGGCCATCGACCATGAA ATGAAGCGTCTGGGCATCGATTGCGTCTATCTGGACATCAGTCACAAGCCTGAAGCCTTCATCAAGACCCACTTCCCGACGGTCTACGAGCGCTGCCTGG AATTCTCCATCGACATCACCCGACAGCCGATTCCGGTGGTGCCGGCCGCGCATTACACATGCGGCGGCGTGATGGTCGACAACAAGGGGCGCACCGACGT ACCCGGCCTGTACGCCATTGGCGAGACCAGCTTCACCGGCTTGCACGGCGCCAACCGCATGGCCAGTAACTCGCTGCTTGAATGCTTTGTCTACGCACGC TCGGCGGCTGCGGACATCAAGGAGCAACTGACCAATATCCCGATGCCGGACAACCTGCCCGCCTGGGACGCCAGCCAGGTCACCGACTCGGACGAAGACG TGATCATTGCGCACAACTGGGACGAACTACGGCGCTTCATGTGGGACTATGTCGGCATCGTGCGCACCAACAAGCGCTTGCAGCGCGCCCAGCACCGGGT TCGTCTGCTGCTCGATGAAATCGATGAGTTCTACAGTAACTACAAGGTCAGCCGCGACCTGATCGAGCTGCGCAATCTGGCGCAGGTGGCCGAATTGATG ATCCGCTCGGCGATGGAGCGCAAGGAAAGCCGAGGCCTGCATTACACCCTGGATTACCCGGACATGTTGCCTCAGGCGCTGGACACTATTCTGGTACCGC CCACCTACGCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACTTCAGGCGGACACGCAGGCGTCGGTGGGTATCCGGCGTCAGCGCGTCGCGGGGAATGCAGATGCTTTTTATGCAGCGCCCGGCTCGCCCCTCTTTTAC GGGACGAAAGCGCAAAATGACGATCCATGGCAAAGCCAGGCTGTCACGACAGAGCTGCACAGGCTGCCAGCTGCCCTGTTCGCTCCACACTTGCCAGCCC TTGCGATCACGCCGCAAGGCGGTGACTGCCGAACGGCGCGCAAGCAGGATCGATCCGGGAATGACCCAAAAACCATGAGCCAGGCAAAACAGGGCGCCGA GCGCAGACGCCCAGCCGGGGATATCAAGCCAATACAGGGCAATGAGCGCCAGTAACTGAACGCTCAGATACCCGACCAACAGCAGGCGCGAGGCCTGCCA GTGGCACTCGAAACCATCACTTGGGCTGGACACGGTCCAGAATCATGCGAACCATGCGCTGCAATTCGGGATCTTCGGACTCGGCGCGCTGCATGAACCA
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| Amino Acid Sequence |
>L-aspartate oxidase
MSQHFQHDVLVIGSGAAGLSLALTLPGHLRIAVLSKGDLSNGSTFWAQGGVAAVLDDTDTVQSHVEDTLNAGGGLCNEEAVRFTVEHSRESIQWLIDQGV PFTRGDHSDTEESGFEFHLTREGGHSHRRIIHAADATGAAIFKTLFEQASKRPNIELLDQRAAIDLITERRLGLTGQRCLGAYVLNRKTGEVDTYGARFT ILASGGAAKVYLYTSNPDGACGDGIAMAWRSGCRVANLEFNQFHPTCLYHPQAKSFLITEALRGEGAYLKLPNGERFMPRFDERAELAPRDIVARAIDHE MKRLGIDCVYLDISHKPEAFIKTHFPTVYERCLEFSIDITRQPIPVVPAAHYTCGGVMVDNKGRTDVPGLYAIGETSFTGLHGANRMASNSLLECFVYAR SAAADIKEQLTNIPMPDNLPAWDASQVTDSDEDVIIAHNWDELRRFMWDYVGIVRTNKRLQRAQHRVRLLLDEIDEFYSNYKVSRDLIELRNLAQVAELM IRSAMERKESRGLHYTLDYPDMLPQALDTILVPPTYAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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