Pseudomonas cichorii JBC1, BH81_RS20170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46977
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009435 NAD biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008734 L-aspartate oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pci00760 Nicotinate and nicotinamide metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pci01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pci00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00890 FAD binding domain IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain 8 392 3.4E-103
Gene3D G3DSA:1.20.58.100 - - - 425 537 4.1E-48
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 8 403 0.0
SUPERFAMILY SSF56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily 238 353 7.92E-43
PIRSF PIRSF000171 SDHA_APRA_LASPO - - 1 532 3.3E-32
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 9 28 1.5E-8
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 355 377 1.5E-8
NCBIfam TIGR00551 JCVI: L-aspartate oxidase IPR005288 L-aspartate oxidase 6 520 0.0
PANTHER PTHR42716 L-ASPARTATE OXIDASE IPR005288 L-aspartate oxidase 5 531 0.0
SUPERFAMILY SSF46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily 425 526 9.94E-32
Coils Coil Coil - - 453 473 -
FunFam G3DSA:3.50.50.60:FF:000060 L-aspartate oxidase - - 8 271 1.3E-112
FunFam G3DSA:1.20.58.100:FF:000002 L-aspartate oxidase - - 426 535 1.1E-48
Pfam PF02910 Fumarate reductase flavoprotein C-term IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal 441 521 4.2E-14
Gene3D G3DSA:3.90.700.10 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily 248 361 0.0
FunFam G3DSA:3.90.700.10:FF:000002 L-aspartate oxidase - - 248 361 1.3E-53
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 4 448 8.1E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.